Laj: viewing and manipulating the output from pairwise alignment programs
Laj is a tool for viewing and manipulating the output from pairwise alignment programs such as blastz. It can display interactive dotplot, pip, and text representations of the align...2622 days ago
Gooey: Turn (almost) any Python command line program into a full GUI application with one line
Turn (almost) any Python command line program into a full GUI application with one line The easiest way to install Gooey is via pip pip install Gooey Alternatively, you can...1647 days ago
chromosight: Computer vision based program for pattern recognition in chromosome (Hi-C) contact maps
...loops (and other patterns) in Hi-C contact maps. Stable version with pip: pip3 install --user chromosight...chromosight or, if you want to get the latest development version: pip3 install --user -e git+https:...1504 days ago
tinycov: standalone command line utility written in python to plot coverage from a BAM file
...t Edwards' genome coverage plotter. To install the stable version: pip3 install --user tinycov To i...version: git clone https://github.com/cmdoret/tinycov.git cd tinycov pip install ....1504 days ago
Luigi: a Python package that helps you build complex pipelines of batch jobs.
....9 tested) package that helps you build complex pipelines of batch jobs. It handl..., command line integration, and much more. Run pip install luigi to install the...e latest release is hosted on readthedocs. Run pip install luigi[toml] to instal...1046 days ago
381 days ago