Results for "polymorphisms"
Blogs
Structural variation: the hidden genomic treasure
Genome re-sequencing projects have revealed substantial amounts of genetic variation between individuals extending beyond single nucleotide polymorphisms (SNPs) and short indels. Structu...2712 days ago
List of motif discovery tools !
...SePreSA -- SErver for the PREdiction of populations susceptible to Serious Adverse drug reaction Find information about populations carrying polymorphisms within protein binding pocket...2003 days ago
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Bookmarks
- ...o simulate diploid genomes with SNPs and insertion/deletion (INDEL) polymorphisms, and simulate reads with unif...cing errors, but this can be partly compensated by simulating INDEL polymorphisms.Wgsim outputs the simulated p...
2883 days ago
simuG: a general-purpose genome simulator
...d bioinformatics analyses. Here we introduce simuG, a lightweight tool for simulating the full-spectrum of genomic variants (single nucleotide polymorphisms, Insertions/Deletions, copy n...1630 days ago
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Top-level pages
- ...ng protein–protein interactions; analysing single nucleotide polymorphisms to hunt for genetic sources o...be studied in more detail on the structure level. Single Nucleotide Polymorphisms can be mapped on 3D structure...
3957 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...code for the detection and the classification of single nucleotide polymorphisms in transformed De Bruijn grap...sidues- collected though PSI-BLAST; can be applied to nonsynonymous polymorphisms or laboratory-induced missens...2919 days ago
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Wire posts
News
High Density Sheep SNP Genotyping Chip released!!!
...nd the USDA as part of the International Sheep Genomics Consortium. It features over 54,241 evenly spaced probes that target single nucleotide polymorphisms (SNPs). More than 18,000 of t...3907 days ago
Webinar on 'An integrated RNA and DNA approach to unravel genetic regulation in cancer'
...netic regulation in cancer' Abstract Whole exome DNA sequencing (WES) or whole genome DNA sequencing (WGS) allows detection of mutations and polymorphisms in all exonic and genomic reg...3381 days ago
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Opportunity posts
Structural polymorphism analysis from NGS data
...on, functional variation, gene/protein expression and phenotypic adaptation. The successful candidate will be in charge of the detection of polymorphisms including structural variants...3958 days ago
A computational postdoc position and a bioinformatician position
...mmediately available. Successful candidates will be involved in the design and implementation of strategies to study the role of inherited polymorphisms in combination with timedepen...2308 days ago
ResearchLabs posts
- ...n, or other perturbation experiments in combinations of genes in S. cerevisiae, C. elegans or mouse. Using genome-scale genotyping of natural polymorphisms in S. cerevisiae and human po...
3717 days ago
Video
- ...principle of the mapping scheme was to develop, by recombinant DNA techniques, random single-copy DNA probes capable of detecting DNA sequence polymorphisms when hybridized to restrictio...
3883 days ago
Tags
DnaSP: DNA Sequence Polymorphism, is a software package for the analysis of DNA polymorphisms
DnaSP, DNA Sequence Polymorphism, is a software package for the analysis of DNA polymorphisms using data from a single locus (a multiple sequence aligned -MSA data), or from several loci (a Multiple-MSA data, such as formats generated by some assembler RAD-seq software). DnaSP can estimate severa...Tags: DnaSP, DNA, Sequence, Polymorphism, software, package, analysis, DNA, polymorphisms
1266 days ago
Comments
Comment on "List of popular bioinformatics software/tools"
A program for annotating and predicting the effects of single nucleotide polymorphisms (SNP) http://snpeff.sourceforge.net/ http://snpeff.sourceforge.net/SnpEff_paper.pdf3581 days ago
Comment on "Bioinformatics approach to Boar Taint"
ISMB/ECCB 2011 Application of whole genome resequencing to detect sequence polymorphisms underlying boar taint http://www.iscb.org/archive/conferences/iscb/cms_addon/conferences/ismbe...3927 days ago
