Results for "pubmed"
Top-level pages
...abases (mostly errors in annotation), in particular since errors propagate easily through links. Also databases of scientific literature (such as PUBMED, MEDLINE) provide additional...3963 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...formatics 25(16):2078-9, 2009 PubMedCentral SAM format specificat...nome Biol 11(11):R116, 2010. PubMed FastQC: a quality control to...at Rev Genet. 10:669-80, 2009 PubMed ChIP-seq and Beyond: new and...Rev Genet 12(7):499-510, 2011 PubMed [A review of methods availabl...3795 days ago
List of In-silico Binding Site Prediction Tools
Following are the list of In-silico Binding Site Prediction in Proteins tools CASTp : http://sts.bioengr.uic.edu/castp/ Computed Atlas of Surface Topography of p...3760 days ago
Commercial and public next-gen-seq (NGS) software
Integrated solutions CLCbio Genomics Workbench - de novo and reference assembly of Sanger, Roche FLX, Illumina, Helicos, and SOLiD data. Commercial next-gen-seq softwar...3535 days ago
Apps for Busy Bioinformatics Researchers !!!
...es a RSS reader for journal feeds as well as a PubMed viewer. Key Features: Loo...nnection for local databases. View and search PubMed in table view. GeneIndex..., Ensembl, NCBI, Gene Ontology, KEGG Pathways, PubMed, Genomic Variations and many...3557 days ago
Software packages for next gen sequence analysis
Integrated solutions * CLCbio Genomics Workbench - de novo and reference assembly of Sanger, Roche FLX, Illumina, Helicos, and SOLiD data. Commercial next-gen-seq softw...3258 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...sembly, variant detection, RNA-Seq, ChIP-Seq, Genome Browser, etc (entire list on website); Main Workbench offers database search (Genbank, Blast, Pubmed); 2000 organizations have inv...2925 days ago
Tools for bacterial whole genome annotation
...ene prediction algorithms with homology based methods. The first version of NCBI Prokaryotic Genome Automatic Annotation Pipeline (PGAAP; see Pubmed Article) developed in 2005 ha...2348 days ago
Bioinformatics tools to detect horizontal gene transfer (HGT) in genomes
Horizontal gene transfer (HGT), the “non-sexual movement of genetic material between two organisms” , is relatively common in prokaryotes and single-ce...866 days ago
Some useful Bioinformatics links
...card/command-line-overview.html Chromosome-scale scaffolding of de novo genome assemblies based on chromatin interactions. - PubMed - NCBI https://www.ncbi.nlm.nih.gov/pubmed/24185095 MAFFT ver.7 - a mult...2257 days ago
