Comment on "Does anyone have Nanopore latest updates?"
Long read nanopore sequencing for detection of HLA and CYP2D6 variants and haplotypes http://f1000research.com/articles/4-17/v13404 days ago
Comment on "Which of the following programming language is best for a bioinformatics beginner?"
Read this report: http://qz.com/298635/these-programming-languages-will-earn-you-the-most-money/3469 days ago
3603 days ago
Comment on "Commercial and public next-gen-seq (NGS) software"
...SHRiMP: http://compbio.cs.toronto.edu/shrimp/SHORE (1001genomes.org): http://1001genomes.org/downloads/shore.htmlCloudBurst (Highly Sensitive Short Read Mapping with MapReduce): Ple...3637 days ago
Comment on "Next generation sequencing in R or bioconductor environment"
R package SPP for chip-seq analysis. It can read quite a few aligner's output file. Here is the original package tutorial. http://compbio.med.harvard.edu/Supplements/ChIP-seq/tutoria...3638 days ago
Comment on "List of popular bioinformatics software/tools"
TopHat http://tophat.cbcb.umd.edu/manual.shtml is a program that aligns RNA-Seq reads to a genome in order to identify exon-exon splice junctions. It is built on the ultrafast short read mapping program Bowtie.3663 days ago
Comment on "Bioinformatics Algorithm Demonstrations and Tutorials"
Introduction to Bioinformatics Algorithms by Jones and Pevzner http://read.pudn.com/downloads160/ebook/722845/Intro%20to%20Bioinformatics%20Algorithms.pdf3917 days ago
Comment on "List of popular bioinformatics software/tools"
Hi all, Nice collection of software links. It looks you all are big fan of open source software as well. Please read this Standford University report which outlines recent activ...3961 days ago