Results for "rna"
Blogs
Integrative RNA and ChIP-Seq analysis of regulatory T-cells
Integrative RNA and ChIP-Seq analysis of regulatory T-cells , a Strand NGS application n...T-regulatory and T-helper cells. Learn how the gene expression profiles from RNA-Seq and FoxP3 DNA-protein bin...3206 days ago
Integrated mRNA and microRNA transcriptome analysis in Strand NGS
...noma case study, this paper highlights the integrated transcriptome analysis capabilities of Strand NGS demonstrating the identification of miRNA – mRNA interactions in regulatory ne...3206 days ago
Computer simulation of genetic mechanism !!
...BEERS BEERS was designed to benchmark RNA-Seq alignment algorithms and...t aim to reconstruct different isoforms and alternate splicing from RNA-Seq data...http://www.ebi.ac.uk/projects/bargen/ kernalPop A spatially explici...2984 days ago
Live Webinar on RNA-Seq Data Analysis on 9 Nov 2016
Live Webinar on RNA-Seq Data Analysis Abstract: Strand NGS supports...ve workflow for the analysis and visualization of RNA-Seq data. The workflow includ...inar will give an overview of the features in the RNA-Seq data analysis workflow in...2764 days ago
Important Journals, Blogs and Forums for Bioinformaticians
Journals. Most journals have RSS feeds for their current updates. Bi...ing new developments in NGS data & analysis. RNA-Seq Blog: Transcriptome Resea...Seqanswers - bioinformatics forum Seqanswers - RNA-Seq forum BioStar BOL...2652 days ago
Bioinformatics tools developed for Oxford Nanopore data analysis !
MinION is the only portable real-time device for DNA and RNA sequencing. Each consumable flow cell can now generate 10–20 Gb of DNA sequence data. Ultra-long re...2329 days ago
BBTools for bioinformatician !
...hen mapping small reads (e.g. miRNA) When mapping small RNA's with BBMap use the followin...sp;Note: For BBMerge with micro-RNA, you need to add the flag&nbs...ble, the quality values can alternately be set to allow errors to...ble, the quality values can alternately be set to allow errors to...2279 days ago
- ...his https://github.com/trinityrnaseq/trinityrnaseq/releases/tag/Trinity-v2.6.6 ➜ cd trinityrnaseq-Trinity-v2.6.6 ➜ trini...tory '/home/urbe/Tools/trinityrnaseq-Trinity-v2.6.6/Chrysalis'...ory: "/home/urbe/Tools/trinityrnaseq-Trinity-v2.6.6/trinity_out...
2142 days ago
List of motif discovery tools !
...es. PPSearch Search your query sequence against PROSITE pattern database for protein motifs. PRIDB -- Protein-RNA Interface DataBase Find information about protein-RNA complexes from the Protein Da...2002 days ago
Understanding reads mapping and flags !
...y alignment flag. Chimeric reads are indicative of structural variation in DNA-seq and it may indicate the presence of chimeric genes in RNA-seq. In short, chimeric read...1846 days ago
