Comment on "A quick guide to Phred scaling"
...d scaling: Phred quality scores: Phred quality scores are re...se call. For example, a Phred score of 10 corresponds to a base c...or of 1 in 100, while a Phred score of 30 corresponds to a probab...e in the base call. The Phred scores are calculated based on the...425 days ago
Comment on "Basic command-line to run BLAST"
...atches to those words in the database. It then expands the matches to identify longer regions of similarity, called "alignments," and calculates a score for each alignment that refle...430 days ago
Comment on "Basic command-line to run BLAST"
...results can be viewed and downloaded. The results include information about the sequences that matched the query sequence, including the alignment score, identity, and e-value....433 days ago
Comment on "LAMSA: fast split read alignment with long approximate matches"
...[INT] Length of BWT-seed. [19] -f --fastest Use GEM-mapper's fastest mode(--fast-mapping=0). [false] Scoring options: -m --match-sc [INT] Match score for SW-alignment. [1] -M --mi...2132 days ago
Comment on "GraphMap - A highly sensitive and accurate mapper for long, error-prone reads"
...t paths, and their overlap still skipped. [false] -M, --match INT Match score for the DP alignment. Ignored...mbiguity FLT All mapping positions within the given fraction of the top score will be counted for ambiguity...2302 days ago
Comment on "Which are the best statistical programming languages to study for a bioinformatician?"
... Yes Path Analysis Yes Yes Yes Propensity Score Matching Yes...3562 days ago
Comment on "What a bioinformatician always dream for ???"
This dream "A girl/boy with lesser E-values and higher compatibility score" is universal :)3790 days ago
Comment on "What a bioinformatician always dream for ???"
Lesser E-values and higher compatibility score :) ... then it will be real BLAST :P3815 days ago