Tags: PSI Blast, BLAST, NCBI, Alignment, Search, Sequence
3907 days ago
How to find a files in a folder or sub folders?
Hi Bioinformaticians, I am new to bioinformatics and Perl. So, please execuse me if I disturb you all with newbie question. I am strugling to find a specific files (cattle_genome.fasta) from a folder and sub folders, and read it. I got some of the help form this website http://s...Tags: Recursively Search, Folders, Sub Folder, Find, Read, Search, Perl.
3921 days ago
Tags: Koders, Coders, Bioinformatics Scripts, Open Source Codes, Computational Biology, Scripts, Search, Code Search
3915 days ago
Find certain files/documents in Linux OS
As bioinformatician I know the fact that we usually handle the large dataset and lost in the huge numbers of files and folders. In order to search the missing file a strong search command is required. The Linux Find Command is one of the most important and much used command in Linux sytems. Find ...Tags: Bioinformatics, Computational Biology, Linux, Find, Search, Look, Example
3680 days ago
Tags: Bioinformatics, Computational Biology, Linux, History, Search, Find, Delete, Shell, Command
3613 days ago
How to search for small peptide (hexapeptide) sequence ?
How to search for small peptide (hexapeptide) sequence which are modified by single D-amino acid replacement from parent peptide sequence? Which database or tool is available to find available sequence similarity?? The parent peptide sequence is a part of human protein with all six L-amino acid ...Tags: Hexapeptide, Sequence, Search, Peptide, Database, Tool, Find, Similarity
3223 days ago
Efficient genome searching with Biostrings and the BSgenome data package
Tags: BioStrings, R, Search, Pattern, Genome, Chromosome, Bioinformatics
2980 days ago
Tools for Searching Repeats And Palindromic Sequences
What are genomic interspersed repeats? In the mid 1960's scientists discovered that many genomes contain stretches of highly repetitive DNA sequences ( see Reassociation Kinetics Experiments, and C-Value Paradox ). These sequences were later characterized and placed into five categories: Simple...Tags: Bioinformatics, Search, Repeats, Palindromic, Sequences, Tools, Software
2210 days ago