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Results for "sequences"

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• • Abhinav@abhinav

  

  PLATform for Assembling NUcleotide Sequences http://platanus.bio.titech.ac.jp/ #Platanus #Assembler #Genome

  2950 days ago

• • Neelam Jha@neelam

  

  PAired-eND Assembler for DNA sequences https://github.com/neufeld/pandaseq #Sequence #Assembler #PANDAseq

  2949 days ago

• • Jit@jit.aber

  

  A perl script for mapping fasta formated sequences to multiple reference sequences using one of several alignment programs. http://seq.crg.es/download/software/Miro/doc/run_Mapping.html #Perl #Script

  2767 days ago

• • Jit@jit.aber

  

  #GC-Profile: a web-based tool for #visualizing and analyzing the #variation of #GC content in #genomic sequences https://www.ncbi.nlm.nih.gov/pmc/articles/PMC1538862/

  2625 days ago

• • Rahul Nayak@rahul

  

  Get the sequences using coordinates in bed file. $ bedtools getfasta -fi input_file.fa -bed regions_file.bed #Bed #Extract #Sequence #bedtools

  2242 days ago

• • Poonam Mahapatra@poonam

  

  https://www.ncbi.nlm.nih.gov/Class/NAWBIS/Modules/Phylogenetics/phylo12.html #P-distance #Distance #Calculation #Sequences #Align

  2209 days ago

• • Shruti Paniwala@shruti

  

  Finding coding regions in DNA sequences http://genome.crg.es/courses/Lisbon04/exercises/day2/Perl_programming/index.html #Perl #Genes #Script

  2153 days ago

• • Jit@jit.aber

  

  #Mappy provides a convenient #interface to #minimap2, a fast and accurate #C program to #align #genomic and transcribe nucleotide #sequences. https://pypi.org/project/mappy/

  2040 days ago

• • Neelam Jha@neelam

  

  Consensus of nucleotide sequences https://www.perlmonks.org/bare/?node_id=500962 #Consensus #Nucleotide #DNA

  2030 days ago

• • Jit@jit.aber

  

  Extract sequence by ids $ xargs samtools faidx Adineta_vaga.v2.pep.fa < AlienIds > allAlienSeq.fa #Extract #Ids #Sequences

  1963 days ago

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