Results for "sets"
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Comment on "Short-read assembly using Spades !"
...sing tools such as QUAST or BUSCO. These tools assess the completeness and accuracy of the assembled genome by comparing it to reference genomes or sets of conserved genes. Iter...427 days ago
Comment on "Sibelia: A comparative genomics tool"
...with "Sibelia" executable. Directory "examples/Sibelia" contains two sets of bacterial genomes. The eas...plification parameters. There are two another simplification parameters sets, called "fine" and "far". To...1297 days ago
Comment on "Installing Porechop on Ubuntu !"
...-t 40 > ONT_choppedNcorrected.fa Loading reads/media/urbe/MyDDrive/ONTdata/allONT/allONT.fasta1,634,477 reads loaded Looking for known adapter sets10,000 / 10,000 (100.0%) Best...2118 days ago
Comment on "Venn Diagrams on R Studio"
Six-way Venn diagram https://stackoverflow.com/questions/32440128/nice-looking-five-sets-venn-diagrams2330 days ago
Comment on "Comparative genomics educational material and papers bookmarks"
...s they are predicted to encode—was undertaken in the context of cellular, developmental, and evolutionary processes. The nonredundant protein sets of flies and worms are simila...2746 days ago
Comment on "List of gene ontology software and tools"
Thanks for such a useful list of tools for GO study. I found FUNC: a package for detecting significant associations between gene sets and ontological annotations (http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1800870/) also very useful.2986 days ago
Comment on "List of gene ontology software and tools"
...of GO tools. I found FuncAssociate also very useful. It is a web-based tool to help researchers use Gene Ontology attributes to characterize large sets of genes derived from experim...3193 days ago
Comment on "Bio++ : C Language libraries for your biological need"
...ML (Optimize a phylogenetic tree and other model parameters according to maximum likelihood. Several models are supported).bppSeqGen (Simulate data sets according to a phylogenetic t...3838 days ago
Comment on "R and Bioconductor Tutorial"
Memory efficient string containers, string matching algorithms, and other utilities, for fast manipulation of large biological sequences or sets of sequences. http://www.bioconductor.org/packages/2.12/bioc/html/Biostrings.html3915 days ago
- High-throughput experimental technologies are generating increasingly massive and complex genomic data sets. The sheer enormity and heterogeneity of these data threaten to make the a...
3930 days ago
