AlignGraph: algorithm for secondary de novo genome assembly guided by closely related references http://bioinformatics.oxfordjournals.org/content/30/12/i319.full #AlignGraph #Alignment #Algo #Referen
Genomic signature: characterization and classification of species assessed by chaos game representation of sequences. http://www.ncbi.nlm.nih.gov/pubmed/10563018/ #ChaosGame #Genome #Signature
Transposable elements and genome evolution https://science.nichd.nih.gov/confluence/download/attachments/72451496/2012_Fedoroff+review.pdf #Evolution #TEs
Tumor and second genome http://www.iflscience.com/health-and-medicine/world-first-scientists-observe-dna-shuttling-between-cells-triggering-tumor #Tumor #Cancer #Second #Genome
Multi fasta to single fasta files $ perl -ne 'if (/^>(\S+)/) { close OUT; open OUT, ">$1.fasta" } print OUT' genome.fasta #Multi-fasta #fasta #multi #genome #files
Map genome-wide DNA double-strand breaks using next generation sequencing http://breakome.utmb.edu/Home.html #DNA #Breaks #Chromosome #Sequencing #Genome
