Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for NGS data analysis,...short read sequences produced by high throughput sequencing technologies. While support is provided for many sequencing technologies, this package is primairly fo...3623 days ago
Commercial and public next-gen-seq (NGS) software
Integrated solutions CLCbio Genomics Workbench -...mercial sequencing and microarray technologies. SeqMan Genome Analyser...esigned for short read sequencing technologies, such as Solexa or 454. Need...kSeq supports multiple sequencing technologies, alignment sources, and viewi...3517 days ago
Software packages for next gen sequence analysis
Integrated solutions * CLCbio Genomics Workbench - de novo and...er specially designed for short read sequencing technologies, such as Solexa or 454. Need...ence data. LookSeq supports multiple sequencing technologies, alignment sources, and viewi...3241 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
Commercial tools Strand NGS offers many different...quencing systems, SOLiD system from Life Technologies, Ion Torrent system from Life Technologies, Helicos from Helicos BioScie...nd pathogenicity Supports all major NGS technologies (Illumina, Ion Torrent, Pac B...2907 days ago
Tools for Searching Repeats And Palindromic Sequences
What are genomic interspersed repeats? In the mid 1960's scientists discovered that many genomes contain stretches of highly repetitive DNA sequences ( see Reassociation...2210 days ago
2868 days ago
Genome Assembly Tools and Software - PART1 !!
The genome assemblers generally take a file of short...ther features of indvidual sequencing technologies. It can combine datasets produced by different technologies (currently Illumina, 454 and...ike those produced by SMRT sequencing technologies (PacBio RS II) and Oxford Nan...2684 days ago
Source Code and Pseudo Code !!
An algorithm is a procedure for solving a problem in terms of the actions to be executed and the order in which those actions are to be executed. An algorithm is merely th...2658 days ago
Awesome perl frameworks, libraries and software - PART 1
A curated list of awesome Perl frameworks, libraries and software. major/MySQLTuner-perl - MySQLTuner is a script written in Perl that will assist you with your My...2488 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
analog -- A feature that appears similar in two taxa which have originated from two different ancestors. ancestor -- Any organism, population, or species from which some...2461 days ago