Perl Special Vars Quick Reference
$_ The default or implicit variable. @_ Subroutine parameters. $a$b sort comparison routine variables. @ARGV The command-line args. R...2636 days ago
Awesome perl frameworks, libraries and software - PART 1
A curated list of awesome Perl frameworks, libraries and software. major/MySQLTuner-...it and spark and Perl. Aralhach/bashobfus - A small bash minifier/obfuscator writ...n $HOME from caches, etc. Useful for $HOME on SSDs, small d...2481 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
analog -- A feature that appears similar in two taxa which have originated from two different ancestors. ancestor -- Any organism, population, or species from which so...2454 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
kallisto Transcript abundance quantification from RNA-seq data (uses pseudoalignment fo...from reference sequences and RNA-seq data (k-mer based) Software...pression of transcripts using RNA-seq data (uses k-mers) http...e k-mers profiles of the RNA-seq paired-end reads Software (J...2363 days ago
2343 days ago
Single Cell RNAseq data analysis tutorial !!
A major breakthrough (replaced microarray...for low-level analysis of single-cell RNA-seq data A step-by-step workflow...for low-level analysis of single-cell RNA-seq data with Bioconductor SCell...-factor models applied to single-cell RNA-seq data separate biological driv...2343 days ago
2343 days ago
Tools for bacterial whole genome annotation
RAST – Web tool (upload contigs), uses the subsystems in the SEED datab...tional genome units such as structural RNAs, tRNAs, small RNAs, pseudogenes, control re...affolds; (iii) ICORN for identifying and correcting small e...2324 days ago
Bioinformatics Web Application Development with Perl
Perl's second wave of adoption came from the growth of the world wide web. Dynamic we...work is a flexible and powerful system for building small to large web apps. It uses th...nt plugin ecosystem. Dancer particularly excels for smaller...2314 days ago
2297 days ago