1546 days ago
jtools : more efficient presentation of regression analyses
...ncture, the unifying theme is the more efficient presentation of regression analyses. There are a number of functions for other programming and statistical purposes as well. Support for...1542 days ago
iSeqQC: a tool for expression-based quality control in RNA sequencing
...cts outliers either produced due to variable laboratory conditions or due to dissimilarity within a phenotypic group. iSeqQC implements various statistical approaches including unsuperv...1538 days ago
SHAMAN: a user-friendly website for metataxonomic analysis from raw reads to statistical analysis
...ing bioinformatics treatment of raw reads for targeted metagenomics, statistical analysis and results visualiz...s 2016] which showed to be both accurate and fast [Wescott 2015].The statistical analysis is based on DESeq2 R...1355 days ago
MAGIC: A tool for predicting transcription factors and cofactors driving gene sets using ENCODE data
The algorithm presented herein, Mining Algorithm for GenetIc Controllers (MAGIC), uses ENCODE ChIP-seq data to look for statistical enrichment of TFs and cofactors i...1254 days ago
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