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Results for "structural and sequence variation"

Wire posts

  • Robert M Willioms

    A tool set for short variant discovery in genetic sequence data. http://genome.sph.umich.edu/wiki/Vt #Tool #VT #Variant

    3518 days ago

  • Manisha Mishra

    eMatchSite: Sequence Order-Independent Structure Alignments of Ligand Binding Pockets in Protein Models http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1003829 #Protein #Binding

    3514 days ago

  • John Parker

    MAP2: multiple alignment of syntenic genomic sequences http://nar.oxfordjournals.org/content/33/1/162.full #Alignment #Synteny #Sequence

    3512 days ago

  • Jitendra Narayan

    Alignathon: A collaborative competition to assess the state of the art in whole genome sequence alignment. http://compbio.soe.ucsc.edu/alignathon/index.html #Alignment #Simulation #Evolver

    3474 days ago

  • Rahul Nayak

    Sequence analysis http://bio.lundberg.gu.se/courses/ht03/bio1/bio1_e2b.html #Sequence #Alignment #Algorithms #C #C++

    3458 days ago

  • Jitendra Narayan

    Seqloc: Handle sequence locations for bioinformatics https://hackage.haskell.org/package/seqloc-0.6 #Sequence #Location #Package

    3448 days ago

  • Shruti Paniwala

    What Makes a Protein Sequence a Prion? http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1004013 #Protein

    3402 days ago

  • Rahul Agarwal

    http://churchill.nchri.org/ #genetic #variation

    3378 days ago

  • Shruti Paniwala

    Scientists has sequence 64 full #human #genomes, representing 25 different human populations from across the globe. https://science.sciencemag.org/content/372/6537/eabf7117

    1103 days ago

  • Rahul Nayak

    Sort FASTA sequence by length: cat f1.fasta| awk '{if($0 ~ /^>/){printf "%st", $0}else{print length($0)"t"$0}}'| sort -k2n,2| awk '{print $1"n"$3}' > sequence.fasta #Sort #Fasta #Trick #Onliner

    3186 days ago

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