Tools to detect synteny blocks regions among multiple genomes
...tifying uncharacterized genes, putative regulatory elements and novel structural features of study species by...parative genomic tool: It assists biologists in analysing the genomic variations that correlate with pathogen...2604 days ago
Dynamic chromosome breakpoints !!!
...he copy number of hundreds or even thousands of genes. The second are structural abnormalities which can be un...ve some evolutionary importance and considered as a driver of genetic variation. Moreover, the chromosome bre...3546 days ago
Computer simulation of genetic mechanism !!
Computer simulation is the discipline of designing a model of an actual or theoretical...FIGG FIGG is a genome simulation tool that uses known or theorized variation frequency, per a given fragme...2969 days ago
Structural variation: the hidden genomic treasure
...isms (SNPs) and short indels. Structural Variations (SVs) and Copy Number Variati...oaches. The mostāstudied structural variants are copy number variations (CNVs) which can be generated...ut became fixed in a species. Structural variation can be neutral but has also i...2697 days ago
Software and Tools to detect structure variation with long reads !!
...T) Sequencing, you can access structural variations having a broad range of sizes...issing heritability linked to structural variation Unambiguously identify genomi...MultiBreak-SV: It identifies structural variants from next-generatio..._Sheet.pdf PBHoney: the structural variation discovery tool&nbs...2602 days ago
List of GOI approved peer reviewed bioinformatics and computational biology journals
Unfortunately, we now live in a world where the integrity of peer-reviewed journals is being threatened by the rise o...in Computational Chemistry Scopus Chemistry; Mathematics Computational and Structura...2561 days ago
List of Research Institutes in India (Biological Sciences/ Biotechnology)
A laboratory (normally lab) is a facility that provides controlled conditions in which sci....inWeb: ncpgr.nic.in/Research Areas: Nutritional, structural, and functional genomics of v...genetics, molecular oncology, molecular virology, structura...2358 days ago
List of cancer genomics research web resources !
Major web resources for cancer genomics research CGHub http...linical information; gene expression; copy number variation; visualization CGWB https://...gwb.nci.nih.gov/ Visualization; gene mutation and variation; automated analysis pipeline...2314 days ago
List of motif discovery tools !
In genetics, a sequence motif is a nucleotide or amino-acid sequence...e topography of proteins with structural and topographical mapping of...ISAM -- Manual ALIgnments for Structurally Analogous Motifs Database...tein Active site Residue - 3D structural motif A server to predict pr...1987 days ago
Understanding reads mapping and flags !
...others are called “supplementary” and are distinguished by the supplementary alignment flag. Chimeric reads are indicative of structural variation in DNA-seq and it may indicat...1831 days ago