Bio++ : C Language libraries for your biological need
C has always been a language that never attempts to tie a progr...quence and Site objects, with various Alphabet support (DNA, RNA, P...tions. Support for alignments.Various I/O formats supported: Fasta,...h various population genetics software.Specific containers for polym...3958 days ago
BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for...ronment in bioinformatics for the Ruby language. This project i...and the Open Bio Foundation. The pro...gency (IPA) as an Exploratory Software Project in 2005RubyForge is a...nt to twice or more lines of other languages because of Ruby's extre...3958 days ago
3932 days ago
Introduction to Bioinformatics
Bioinformatics (Genomics) Biocomputing in a Nutshell. Biologist's Guide...s EMBNet Biocomputing Tutorials Finding the genes in the gen... -Link to graduate student course at the univ...Washington) Protein Sequence Analysis in the Genomic Era...3932 days ago
Virtual Bioinformatics Online Tutorial
There are several vitual online bioinformatics training centres. Here I provide some of them: Virtual Institute...ngham , UK, Virtual school of molecular sciences the prin...I ) MRes Biomolecular Sciences Lecture Notes: 1. The Gene and Bio...3932 days ago
Linux SSH Client Commands for Bioinformatics
Here come on let play with the following basic command line usage of the ssh client.1. Check your SSH...ct and login to remote host: The First time when you login to...rd: remotehost.example.com$ The Second time when you login to...low. This could be because of various reasons such as 1) Sysadmin u...3716 days ago
Keep Your Important SSH Session Running when You Disconnect from Server !!!
As a Bioinformatician/ Computational biologist we swim in the ocean of genomic/proteomics data, and play with them with an ease. In our day to...lation, analysis, comparative study we do need to run exhaustiv.../serverguide/byobu.html) and other commands (disown -a && ex...3714 days ago
Linux Sort Commands for Bioinformatics
Almost all the scripting languages such as Perl, Python etc have bui...in sort, but unfortunately none of them are as flexible as sort comm...pace efficiency GNU sort stands at the top...ed file based on its first column, then the...k3,3 input.txt sort starting from the 4th characte...3637 days ago
Genome Assembly Tools and Software - PART2 !!
...nd a file of quality-value as the input. Since the quality-value file for the hi...affolds that order and orient the contigs. The updated version of Re...r MetagenomicsOmega is a software for assembling and scaffoldin...ency estimation methods. This software uses a simple error correctio...2696 days ago
Awesome perl frameworks, libraries and software - PART 2
...nt - perl interface into various shipping web service API'...l wickline/whack - find the perl sub most in need of refactor...elease - (Perl) Automate software releases Brasil-Perl-Monger...aging document collections in various ways to prepare them for topic...2505 days ago