Tools for Differential expression analysis
apeglm - https://bioconductor.org/packages/release/bioc/html/apeglm.html ashr - https://github.com/stephens999/ashr, https://cran.r-project.org/web/packages/ashr/index.html consensusDE - https://bioconductor.org/packages/release/bioc/html/consensusDE.html DES...Tags: Differential, expression, analysis, Tools
536 days ago
Interesting Bioinformatics Resources !
1. a reproducible workflow. https://www.youtube.com/watch?v=s3JldKoA0zw This two minute video will change your mind on reproducible research 2. Parallel sequencing lives, or what makes large sequencing projects successful https://academic.oup.com/gigascience/article/6/11/gix...Tags: Bioinformatics, Resources, Tools, Methods
533 days ago
Bioinformatics tools to explore SSRs in genomes !
There are several bioinformatics tools that can be used to explore Simple Sequence Repeats (SSRs), which are also known as microsatellites. Here are a few examples: MISA: MISA (MIcroSAtellite) is a web-based tool that can identify SSRs in DNA sequences. It can be used to analyze nucleotide s...Tags: SSR, Microsatellite, Tools, Explore, Server
417 days ago
Bioinformatics Tools for Phylogeny !
Direct access to the individual tools available on this server. Multiple Alignment:Phylogeny:Tree viewers:Utilities: MUSCLE PhyML TreeDyn Gblocks T-Coffee / 3DCoffee TNT Drawgram Jalview ClustalW BioNJ Drawtree Readseq ProbCons MrBayes ATV (A Tree V...Tags: Tools, Phylogeny, MSA
174 days ago
Tags: Virus, Bioinformatics, Tools
3 days ago
Chemical Elements of Bioinformatics
You must be familiar with periodic table and colour pattern, but this time you are going to amaze by new elements table by Eagle genomics. Just check it out and have fun :) http://elements.eaglegenomics.com/Tags: bioinformatics, tools, sequence, blast
3866 days ago
List of bioinformatics workflow management tools !
Here are list of Workflow Managers BigDataScript – A cross-system scripting language for working with big data pipelines in computer systems of different sizes and capabilities. [ paper-2014 | web ] Bpipe – A small language for defining pipeline ...Tags: Workflow, Managers, ngs, tools
1135 days ago