3020 days ago
2761 days ago
Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm)
...s aeruginosa curated annotations. Metagenomic Version: Prodigal can run in metagenomic mode and analyze sequences even when the organism is unknown. Ease of Use: Prodigal can b...2699 days ago
ERGO 2.0 Bioinformatics suites
...microbial metabolic and non-metabolic pathways, ERGO™ assigns functions to genes, integrates genes into pathways, and identifies previously unknown or mischaracterized genes, cr...2561 days ago
CAT/BAT: tool for taxonomic classification of contigs and metagenome-assembled genomes (MAGs)
...BAT) are pipelines for the taxonomic classification of long DNA sequences and metagenome assembled genomes (MAGs/bins) of both known and (highly) unknown microorganisms, as generated...1463 days ago
Predict Gene Ontology with sequences !
PANNZER (Protein ANNotation with Z-scoRE) is a fully automated service for functional annotation of prokaryotic and eukaryotic proteins of unknown function. The tool is designed...1412 days ago
1376 days ago
HairSplitter: assembling long reads in an unknown number of haplotypes
Pros and cons of HairSplitter Limitations of HairSplitter: Not very fast: it re-polishes the whole assembly Limited in the number of haplotypes Strengths of Ha...530 days ago