Understanding DUMP files from NCBI Taxonomy database !
*.dmp files are bcp-like dump from GenBank taxonomy database General information. Field terminator is "\t|\t" Ro...associated with this name name_txt -- name itself unique name -- the unique variant...676 days ago
Tools for Differential expression analysis
apeglm - https://bioconductor.org/packages/release/bioc/html/apeglm.html ashr - https://github.com/stephens999/ashr, https://cran.r-project.org...560 days ago
Interesting Bioinformatics Resources !
1. a reproducible workflow. https://www.youtube.com/w...icle/pii/S2666389921002300 4. A Reproducible Data Analysis Workflow with R Markdown, Git...putational workflows is automated using continuous analysis https://www.nature.com/a...557 days ago
Bioinformatics tools to explore SSRs in genomes !
There are several bioinformatics tools that can be used to explore Simple Sequence Re...search questions, you may find that other tools are more appropriate for your analysis.441 days ago
Chromosome breakpoint - a breakup to remember
Chromosome breakpoint refers to the physical location where a chr...akpoints can be detected using a variety of techniques, including cytogenetic analysis, fluorescence in situ hybridi...440 days ago
Common steps for reads mapping !
...ential step in many types of genomic analysis, such as variant calling and gene expression analysis. Here are some general steps...Post-processing: Depending on the analysis being performed, post-process...emoving duplicate reads, and calling variants. Overall, mapping reads...439 days ago
Steps to find palindrome in genomes !
Palindromes are sequences of nucleotides that read the same b...indromes, but may miss more complex palindromic structures. Dot plot analysis: Dot plot analysis is a graphical method that ca...439 days ago
Calculate the significance of the difference between two trends
To calculate the significance of the d...use a statistical test such as a t-test or ANOVA (analysis of variance). Here are the ge...you choose and the software you use to perform the analysis. The most common methods for...434 days ago
Free Books on Machine Learning and Artificial Intelligent !
An Introduction to Statistical LearningThis book provides a broad and less technica...book is appropriate for anyone who wishes to use contemporary tools for data analysis. https://hastie.su.domains/I...432 days ago
Entire Human Genome Sequencing !
Cost-effective whole human genome sequencing has revolutionized the landscape of genetic research and personalized medicine by making comprehensive genetic analysis accessible to a wider populat...49 days ago