Results for "visualise"
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Smash: An alignment-free method to find and visualise rearrangements between pairs of DNA sequences
Smash is a completely alignment-free method/tool to find and visualise genomic rearrangements. The detection is based on conditional exclusive compression, namely using a FCM (Mar...2938 days ago
- ...-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assemb...-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assemb...n for the preliminary assembly, which can be visualised, such as Figure 2a from the...
2890 days ago
SMASH: An alignment-free tool to find and visualise rearrangements between pairs of DNA sequences
SMASH is a completely alignment-free method to find and visualise rearrangements between pairs of DNA sequences. The detection is based on relative compression, namely using a FCM...2334 days ago
HTTDB - Horizontally transferred transposable elements database
...es are more frequently found. This is mainly due to the historical bias and lack of studies in many taxa. To date, there has been no easy way to visualise each TE or host species, and...2301 days ago
KAT: a K-mer analysis toolkit to quality control NGS datasets and genome assemblies
...file based on whether or not the sequences contain k-mers within a provided hash. plot: Plotting tools. Contains several plotting tools to visualise K-mer and compare distributio...1989 days ago
SeqMonk:A tool to visualise and analyse high throughput mapped sequence data
SeqMonk is a program to enable the visualisation and analysis of mapped sequence data. It was written for use with mapped next generation sequence data but can in theory...2071 days ago
Sequanix: a dynamic graphical interface for Snakemake workflows
A Python library dedicated to NGS analysis (e.g., tools to visualise standard NGS formats). A set of pipelines dedicated to NGS in the form of Snakefiles (Makefile-like with Python...1552 days ago
- ...for genomics (9-15 August 2021) Understanding basic intuition behind machine learning approaches. Using unsupervised learning to cluster and visualise data points Dimension reduct...
976 days ago
- Kablammo helps you create interactive visualizations of BLAST results from your web browser. Find your most interesting alignments, list detailed parameters for each, and export a publication-ready vector image, all without installing any software.
580 days ago
