GAM-NGS: genomic assemblies merger for next generation sequencing
...;blocks) are identified through reads' alignments and stored in a weightedgraph. The merging phase is carried out with the help of this weighted graph that allows an opt...2709 days ago
LIBSVM -- A Library for Support Vector Machines
...t multi-class classification Cross validation for model selection Probability estimates Various kernels (including precomputed kernel matrix) Weighted SVM for unbalanced data Both...2483 days ago
kWIP: The k-mer weighted inner product, a de novo estimator of genetic similarity
The k-mer Weighted Inner Product. This software implements a de novo, alignment free measure of sample genetic dissimilarity which operates upon raw sequencing reads. It is...2183 days ago
DeCoSTAR: Reconstructing the Ancestral Organization of Genes or Genomes Using Reconciled Phylogenies
DeCoSTAR computes adjacency evolutionary scenarios using a scoring scheme based on a weighted sum of adjacency gains and breakages. Solutions, both optimal and near-optimal, are sample...1599 days ago
jtools : more efficient presentation of regression analyses
...ions for other programming and statistical purposes as well. Support for the survey package’s svyglm objects as well as weighted regressions is a common theme...1560 days ago