BOL

Maq: Mapping and Assembly with Qualities http://maq.sourceforge.net/ #Maq #Mapping #Assembly #Qualities

Ten Years of Pathway Analysis: Current Approaches and Outstanding Challenges. http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.1002375 #Pathway #Challenges #Tools

A tool to edit and analyze biological pathways. http://www.pathvisio.org/ #Pathway #Analyse #Tool #Edit #Biological

Assemble short reads http://ged.msu.edu/angus/tutorials/short-read-assembly.html #Tutorial #ABySS #Bacteria #Reads #Assembly #Genomics #NGS

Use multi-core with Perl programs http://perltricks.com/article/61/2014/1/21/Make-your-code-run-faster-with-Perl-s-secret-turbo-module #Perl #MCE #Speed #Module

Love to ping nucleosome positioning using PING 2.0 http://bioinformatics.oxfordjournals.org/content/29/16/2049.abstract #Nucleosome #Position #Chromosome #R #Package #Bioconductor

R getting strong for NGS analysis http://manuals.bioinformatics.ucr.edu/home/ht-seq #Packages #NGS #R #Bioconductor #Bowtie #Sequence #Analysis #SNP

Creates 100 random DNA sequences with 20 residues. sapply(1:100, function(x) paste(sample(c("A","T","G","C"), 20, replace=T), collapse="")) #R #Random #Sequence #DNA #Script

Seqtk is a fast and lightweight tool for processing sequences in the FASTA or FASTQ format. https://github.com/lh3/seqtk #FASTA #FASTAQ #NGS

Certain organisms routinely break universal biological rules. http://www.nature.com/news/microbes-defy-rules-of-dna-code-1.15283?WT.ec_id=NEWS-20140527 #News #Rules

Paving the Way Towards a Successful and Fulfilling Career in Computational Biology http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1003593 #Career

Happy DNA day !!!

Bioinformatics tweeted times at http://tweetedtimes.com/#!/search/bioinformatics/en

A great place to learn coding http://www.codecademy.com #Coding #Learn #Online

UC Irvine Machine Learning Repository! http://archive.ics.uci.edu/ml/ #MachineLearning #Data