BOL

https://gisanddata.maps.arcgis.com/apps/opsdashboard/index.html#/bda7594740fd40299423467b48e9ecf6 #corona #covid-19 #virus

Machine learning with {tidymodels} https://www.r-bloggers.com/machine-learning-with-tidymodels/ #Machine #Learn #MachineLearning #R

Building a #consensus sequence with #vcf files https://cbc.brown.edu/blog/consensus-vcf/

Cancer poisson distribution https://www.r-bloggers.com/cancer-clusters-and-the-poisson-distributions/ #cancer #poisson

Install Git on Ubuntu $ apt-get install git-core #Ubuntu #Git #Install

Awk hack for bioinformatician https://www.shellhacks.com/awk-print-column-change-field-separator-linux-bash/ #Hack #Bioinfo #Bash

Bio-python tutorial for beginners http://biopython.org/DIST/docs/tutorial/Tutorial.html #Python #Bio #BioPython #Tutorial

What is bioinformatics #Understanding #Bioinformatics https://academic.oup.com/bib/article/20/6/1981/5066445

Perl onliner to add string to each of the fasta header. $ perl -p -e 's/^(>.*)$/$1-origin/g' in.fasta > out.fasta #String #Header #Fasta

Multifasta 2 singlefasta cat toy.fasta| awk '{ if (substr($0, 1, 1)==">" {filename=(substr($0,2) ".fa")} print $0 > filename }' #Split #fasta #multifasta

Kill the screen $ screen -X -S [session # you want to kill] quit #Screen #Quit #Linux #Session #Remote

#Rename the #fasta #header and #keep first $ perl -ne 'if (/^(>\S+)/){print "$1\n";}else{print $_;}' realTestDATA.fa > realTestDATA_headerCorrected.fa #Perl

List all files by size in Linux $ ls -l -S | sort -k 5 -n #Linux #Size #List

Ten simple rules to create biological network figures for communication https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1007244 #Rules #Publication

Perl special variable https://perldoc.perl.org/perlvar.html #Perl #variable