BOL
Log in
Username or email
Password
Remember me
Register
Lost password
Activity
News
Opportunity
ResearchLabs
Questions
Pages
Discussion
More
BioScripts
Blogs
Bookmarks
Files
Fun
Groups
Polls
The Wire
Tryst
Videos
Our Sponsors
Download
BioinformaticsOnline(BOL) Apps
in your chrome browser.
The Wire
#Split
Wire posts tagged with 'Split'
Neelam Jha
@neelam
Thread
By
Neelam Jha
1615 days ago
Multifasta 2 singlefasta cat toy.fasta| awk '{ if (substr($0, 1, 1)==">" {filename=(substr($0,2) ".fa")} print $0 > filename }'
#Split
#fasta
#multifasta
Rahul Nayak
@rahul
Thread
By
Rahul Nayak
1929 days ago
Split a multi-FASTA file into individual FASTA files: awk '/^>/{s=++d".fa"} {print > s}' multi.fa
#split
#multifasta
Jit
@jit.aber
Thread
By
Jit
1956 days ago
#Split
the
#BAM
file $ /home/urbe/Tools/bamtools/bin/bamtools split -in improved3.fasta.sorted.bam -reference
#bamtools
BioStar
@biostar
Thread
By
BioStar
2040 days ago
Split the fasta $ pyfasta split -k 100 -o 20 input.fasta -n 1
#split
#pyfasta
#overlaps
Rahul Nayak
@rahul
Thread
By
Rahul Nayak
2209 days ago
#Split
#multifasta
$ cat hg18.fa | awk '{ if (substr($0, 1, 1)==">") {filename=(substr($0,2) ".fa")} print $0 > filename }'
Jit
@jit.aber
Thread
By
Jit
2488 days ago
Split the file in Linux with size. $ split --bytes=50M aaaa.fa
#split
#linux
#size
Jit
@jit.aber
Thread
By
Jit
2615 days ago
Split the bam file by chromosome. $ bamtools split -in file.bam -reference
#Split
#Bam
#Bamtools
Shruti Paniwala
@shruti
Thread
By
Shruti Paniwala
2740 days ago
Slice on the fly with perl: my ($username, $real_name) = (split /:/, $str)[0, 4];
#Perl
#PerlTrick
#Split
Jit
@jit.aber
Thread
By
Jit
2773 days ago
Split the text file with line number in Linux: wc -l abc.txt and then: split -l 60000 abc.txt
#Split
#Break
#Line
#Ubuntu
#Linux
#Tricks