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The Wire
#Clean
Wire posts tagged with 'Clean'
Rahul Nayak
@rahul
Thread
By
Rahul Nayak
2094 days ago
One liner to remove the description information from a fasta file and just keep the identifier $ perl -p -i -e 's/>(.+?) .+/>$1/g' sample1.fa
#clean
#header
#fasta
Jit
@jit.aber
Thread
By
Jit
2518 days ago
awk 'BEGIN {RS = ">" ; FS = "\n" ; ORS = ""} {if ($2) print ">"$0}' all_p_ctg.fa > all_p_ctg_CORRECTED.fa
#remove
#empty
#clean
#fasta
Jit
@jit.aber
Thread
By
Jit
2755 days ago
To clean up a fasta file so only first column of the header is outputted:$ awk '{print $1}' file.fa > output.fa
#Sed
#Clean
#Header
#Fasta
Jit
@jit.aber
Thread
By
Jit
2988 days ago
The clean R graphs
http:/
/
shinyapps.org/
apps/
RGraphCompendium/
index.php
#R
#Graphs
#Clean
#Plot