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The Wire
#perl
Wire posts tagged with 'perl'
Jit
@jit.aber
Thread
By
Jit
3624 days ago
Count the total number of lines in a file. my $total=@{[<INFILE>]};
#Perl
#Count
#Number
#Total
#File
Jit
@jit.aber
Thread
By
Jit
3628 days ago
Remove the blank space from a fasta file. perl -nlwe 'tr/ //d; print if length' fileName
#Delete
#Space
#Fasta
#Perl
#Oneliner
Jit
@jit.aber
Thread
By
Jit
3628 days ago
perl -nle 'if (/^>/) { $sl = 0; print; next } next if ($sl >= 200); $_ = substr($_, 0, 200-$sl) if ($sl + length($_) > 200); $sl += length($_); print;' file.fa >new.fa
#Perl
#Extract
#Fasta
Jit
@jit.aber
Thread
By
Jit
3629 days ago
Force install a Perl module sudo PERL_MM_USE_DEFAULT=1 perl -MCPAN -e "CPAN::Shell->force(qw(install Nginx::Log::Entry))"
#Perl
#Install
#Force
#CPAN
#Module
Jitendra Narayan
@admin
Thread
By
Jitendra Narayan
3630 days ago
Use multi-core with Perl programs
http:/
/
perltricks.com/
article/
61/
2014/
1/
21/
Make-your-code-run-faster-with-Perl-s-secret-turbo-module
#Perl
#MCE
#Speed
#Module
Abhimanyu Singh
@abhimanyu
Thread
By
Abhimanyu Singh
3635 days ago
Perl scripts for Bioinformatics
http:/
/
jura.wi.mit.edu/
bio/
bioinfo/
scripts/
#Perl
#Bioinformatics
#Genetics
#Scripts
Jit
@jit.aber
Thread
By
Jit
3636 days ago
Install Bioperl on ubuntu : sudo apt-get install bioperl
#Bioperl
#Install
#Perl
Rahul Nayak
@rahul
Thread
By
Rahul Nayak
3654 days ago
perl -nle '$count += () = /XY[0-9]+/g; END {print $count}' inputfile
#Count
#Perl
#Perloneliner
Rahul Nayak
@rahul
Thread
By
Rahul Nayak
3728 days ago
Perl module
http:/
/
perlmaven.com/
how-to-create-a-perl-module-for-code-reuse
#Perl
#Module
#Package
Shruti Paniwala
@shruti
Thread
By
Shruti Paniwala
3730 days ago
Useful perl scripts collections
http:/
/
raven.iab.alaska.edu/
~ntakebay/
teaching/
programming/
perl-scripts/
perl-scripts.html
#Perl
#Scripts
Rahul Nayak
@rahul
Thread
By
Rahul Nayak
3827 days ago
Perl Regular expression
http:/
/
raven.iab.alaska.edu/
~ntakebay/
teaching/
programming/
perl2nd/
node1.html
#Perl
#RegularExpression
Shikha Logwani
@shikha
Thread
By
Shikha Logwani
3860 days ago
Perl Special Variables Quick Reference
http:/
/
www.perlmonks.org/
?node_id=353259
#Perl
Jitendra Narayan
@admin
Thread
By
Jitendra Narayan
3870 days ago
Convert space separated data to tab separated: perl -p -i -e 's/\s+/\t/g' file.txt
#Perl
#Tipsoftheday
#Perlonliner
Rahul Nayak
@rahul
Thread
By
Rahul Nayak
3875 days ago
GenBank to FASTA format conversion, Written By Junguk HUR
http:/
/
tinyurl.com/
ntp7w5v
#Perl
#FASTA
#Genbank
Jit
@jit.aber
Thread
By
Jit
3886 days ago
Some useful tricks for next generation seq analyst
http:/
/
chicken.genouest.org/
#Perl
#R
#C
/C++
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