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The Wire
#singleLine
Wire posts tagged with 'singleLine'
Rahul Nayak
@rahul
Thread
By
Rahul Nayak
2253 days ago
Multi-line fasta to single line fasta $ perl -pe '/^>/ ? print "\n" : chomp' in.fasta | tail -n +2 > out.fasta
#Multiline
#Singleline
#Fasta
Jit
@jit.aber
Thread
By
Jit
2261 days ago
#Multiline
Fasta To
#SingleLine
Fasta $ awk '/^>/ {printf("\n%s\n",$0);next; } { printf("%s",$0);} END {printf("\n");}' < file.fa
Jit
@jit.aber
Thread
By
Jit
2279 days ago
perl -pe '/^>/ ? print "\n" : chomp' LR.fasta | tail -n +2 > out.fasta
#singleLine
#Multifasta
#Multi2Single
Neel
@neelam
Thread
By
Neel
2337 days ago
#Convert
a
#multi
-line
#fasta
to a
#singleline
#fasta
$ awk '!/^>/ { printf "%s", $0; n = "\n" } /^>/ { print n $0; n = "" } END { printf "%s", n }' sample1.fa > sample1_singleline.fa