BOL: Results for "Merge"

Results for "Merge"

- Surabhi Chaudhary@surabhi
BBTools for bioinformatician !
...gz --------------------------------------------------------------BBMerge.shBBMerge now has a new flag - "outa" o...cified. Usage: Code: $ dedupe.sh in=assembly1.fa,assembly2.fa out=merged.fa That will absorb exact...
2262 days ago
- Surabhi Chaudhary@surabhi
Illumina based assembly pipeline steps !
Illumina Merge re-sequenced FastQ files (cat) Read QC (FastQC) Adapter trimming (fastp) Removal of host reads (Kraken 2; optional) Variant calling Read alignment (Bo...
868 days ago

- Jit@jit.aber
PEAR: a fast and accurate Illumina Paired-End reAd mergeR
...bsp;is an ultrafast, memory-efficient and highly accurate pair-end read merger. It is fully parallelized an...sitive results. Together with a highly optimized implementation, it can merge millions of paired end reads...
2942 days ago
- Jit@jit.aber
GAM-NGS: genomic assemblies merger for next generation sequencing
GAM-NGS (Genomic Assemblies Merger for Next Generation Sequencing), whose primary goal is to merge two or more assemblies in ord...
2685 days ago
+9 more Bookmarks

- BioStar@biostar
Evaluation of genome assembly software based on long reads
...r , SGA Assembler, Smartdenovo, Abruijn, Ra, DBG2OLC, Spades and Cerulean. The first 8 software use only long reads, while the 3 last software can merge long and short reads
1911 days ago

- Jit@jit.aber
Genome Assembly Tools and Software - PART2 !!
...into haplotypes. GAM-NGS 1.1b – Genome Assemblies Merger for Next Generation SequencingGAM-NGS is able to merge two or more assemblies and it...eads into new contigs; reference contigs are extended or merged; iterating the whole process...
2677 days ago
- Neelam Jha@neelam
Awesome perl frameworks, libraries and software - PART 3
...lence/electron GUI toolkit erinspice/geni-automerge - A tool written in Perl using the Geni.com API which automatically merges sufficiently similar profile...and OpenResty Lua library development mndrix/merge-this - Revision control...
2485 days ago

- Jitendra Narayan@admin
Bioinformatics Definitions
...science in which biology, computer science, and information technology merge to form a single discipline....science in which biology, computer science, and information technology merge into a single discipline.Ther...
3938 days ago
- Jitendra Narayan@admin
Bioinformatics Algorithms
...stances of the same problem (usually recursively), until the instances are small enough to solve easily. One such example of divide and conquer is merge sorting. Sorting can be done...
3937 days ago
+1 more Top-level pages

- Rahul Nayak@rahul
Merge overlapping bed file https://bedtools.readthedocs.io/en/latest/content/tools/merge.html #bed #merge #overlapping
1933 days ago
- Abhinav@abhinav
Merge transcriptome assemblies https://github.com/cboursnell/transfuse #Transfuse #Fuse #Merge
892 days ago

- Pranjali Yadav@pranjali
WuXi has acquired NextCODE Health
...extCODE Health, a genomic analysis and bioinformatics company based in the USA.The acquisition was made for $65 million in cash, and WuXi plans to merge its genome center with NextCO...
3385 days ago
- Neelam Jha@neelam
R 3.2.0 is released
...ed for each, and this is a check that conventions have not got mixed). merge() can create a result which u...Ls ‘internet.dll’ and ‘internet2.dll’ have been merged. In this version it is safe...
3296 days ago

- Jit@jit.aber
Perl script to merge LastZ overlaps
#!/usr/bin/perl use strict; use warnings; use 5.010; # Filter out the exact/direct overlaps from tab seperated alignment file. (lastz format=general- ready) # Do not inclide header in lastz outfile # USAGE: perl filterOverlaps.pl infile > outfile open my $fh, '
2116 days ago
- Jit@jit.aber
Running Transrate !
...or transcriptome file in FASTA format --threads= Number of threads to use (default: 8) --merge-assemblies= Merge best contigs from multiple as...
2114 days ago
+8 more Bio-Scripts