Results for "Package"
Users
About me: ...up contributed/maintained number of web sites that include i) CRDD, ii) OSCADD, iii) OSDDlinux, iv) CSIR Informatics Portal, v) GENESIS, vi) GPSR Packages, vii) OSDDchem, viii)Sysborg...3486 days ago
Blogs
How to install Perl modules manually, using CPAN command, and other quick ways
...and annoying process. Some of the packages like GD is the real pain. Ho...tInstall the perl module:Now your package is ready to install.# make in...command: Loaded plugins: refresh-packagekitupdates-newkey &...h the following message: Reading package lists... DoneBuilding depende...3942 days ago
- ...:\Documents and Settings\Owner>ppmPPM interactive shell (2.2.0) - type 'help' for available commands.PPM> install GDInstall package 'GD?' (y/N): yInstalling package 'GD'...Downloading http://ppm...
3931 days ago
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Bookmarks
- Citrus Perl is a binary distribution of Perl created for GUI application developers. The distribution includes wxPerl, the Perl wrapper for wxWidgets. Where supported by the operating system wxWidgets is available as a package for the 2.8.x stable branch and the 2.9.x development branch.
3908 days ago
Janggu - Deep learning for Genomics
Janggu is a python package that facilitates deep learning in the context of genomics. The package is freely available under a GPL-3.0 license. Detail tutorial at https://janggu.readthedocs.io/en/latest/ USE cases https://github.com/wkopp/janggu_usecases1131 days ago
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Files
R Graphical Cookbook by Winston Chang
...This means that there is sometimes considerable overlap of code between several figures In some cases, it may be necessary to install an add-on package from CRAN to get the code to...2146 days ago
- ...and long reads (PacBio and Oxford Nanopore). In this article we present protocols for five different assembly pipelines that comprise the SPAdes package and that are used for assembl...
816 days ago
Pages
BioRuby :Ruby packages for biologist
BioRuby is a package of Open Source Ruby code, with classes for DNA and protein sequence analysis, alignment, database parsing, and other Bioinformatics tools.BioRuby project...3939 days ago
- ...al HyperGlossary. Defines terms used in different subfields, currently Glycoscience, Protein Structure. LASSAP a LArge Scale Sequence compArison Package Bioinformatics in pre- and p...
3913 days ago
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Top-level pages
- ...n database search programs. Nucleic Acids Res. 25:3389–3402Pearson WR (2000) Flexible sequence similarity searching with the FASTA3 program package. Methods Mol. Biol. 132:185&n...
3939 days ago
- ...databases. It is capable of handling simple submissions that contain a single short mRNA sequence, and complex submissio Staden The Staden Package consists of a series of tools...
3934 days ago
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Wire posts
News
R package for visualising GO enrichment
An R package that visualizes the GO enrichment results as word clouds and arranges them together with figures of experimental data. This allows us to draw informative summ...3931 days ago
- ...ect access to single results, and performing logical operations over them. Massimiliano Orsini and Simone Carcangiu develope a new and fast fast package "BlaSTorage" to parse and sto...
3881 days ago
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Opportunity posts
Post-doctoral Research Assistant in Genetics
...o contact Dr. Denis Larkin, Comparative Biomedical Sciences Department on +442071211906 or email: dlarkin@rvc.ac.uk We offer a generous reward package. For further information a...3613 days ago
Adhoc Bioinformatics Faculty Position @ NIT
...y/ Bioinformatics Candidates must possess First class (60% aggregate marks or 6.5 CGPA) at B. Tech/ M. Sc and M. Tech. Desirable: Ph. D Pay Package: All selected candidates shal...3615 days ago
- +5 more Opportunity posts
Bio-Scripts
- JitMeta (base) ➜ JitMeta conda create --name JitMetaENV Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.
1209 days ago
- (JitMetaENV) ➜ JitMeta conda install grabseqs -c louiejtaylor -c bioconda -c conda-forge Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.
1208 days ago
- +88 more Bio-Scripts
Tryst
Tryst with a Bioinformatician # Dr Altan Kara
...read. What's your all-time favourite bioinformatics package, and why? For me, the best bioinformatics package is R/Bioconductor. The reason...by only looking the output(s) of the employed pipelines/packages/tools. ...2354 days ago
Groups
...s also influenced by Eiffel and Lisp. Ruby was first designed and developed in the mid-1990s by Yukihiro "Matz" Matsumoto in Japan. BioRuby is a package of Open Source Ruby code, wit...3912 days ago
Tags
Painless package development for R
Devtools makes package development a breeze: it works with R’s existing conventions for code structure, adding efficient tools to support the cycle of package development. With devtools, developing a package becomes so easy that it will be your default layout whenever you’re writing a...Tags: Bioinformatics, R, Dev, Package, Devtools, RPackages, Tutorial
2916 days ago
RCircos: an R package for Circos 2D track plots
RCircos package provides a simple and flexible way to make Circos 2D track plots with R and could be easily integrated into other R data processing and graphic manipulation pipelines for presenting large-scale multi-sample genomic research data. It can also serve as a base tool to generate comple...Tags: Bioinformatics, NGS, R, Rcircos, Package, Plot, Circle, Genome, Genes, Visualization
2899 days ago
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Comments
Comment on "How to install Perl modules manually, using CPAN command, and other quick ways"
...it should install things into your conda-directory. When you install packages via cpan it will also print the folder perl is installing the package into. If you want to be extr...408 days ago
Comment on "Tools for Differential expression analysis"
...sion analysis, including: DESeq2: This R package is widely used for analyzing...ifferential expression. edgeR: Another R package that is commonly used for dif...rential expression. NOISeq: This is an R package that is used for differential...412 days ago
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