CGView - Circular Genome Viewer
GView is a Java package used to display and navigate bacterial genomes. GView is useful for producing high-quality genome maps for use in publications and websites, or as a visualization tool in a sequence annotation pipeline. Users can interact with the genome using a powerful pan-and-zoom inter...Tags: Bioinformatics, CGView, Circular, Genome, Viewer
2776 days ago
BLAST Ring Image Generator (BRIG)
BRIG is a free cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a focus on handling genome assembly data. The application is available at: http://sourceforge.net/projects/brig If you have any questions or comments, post t...Tags: Bioinformatics, BLAST, Circular, Genome, Viewer, Ring
2765 days ago
Tags: Bioinformatics, DECIPHER, Genome, Viewer, Analyse
2765 days ago
Tags: Bioinformatics, Strudel, View, Synteny, Genome, Viewer, Comaparative genomics
2765 days ago
Tags: Bioinformatics, Musrsaki, Plot, Synteny, Genome, Viewer, Comparative genomics
2765 days ago
GenomeRing: alignment visualization based on SuperGenome coordinates
The number of completely sequenced genomes is continuously rising, allowing for comparative analyses of genomic variation. Such analyses are often based on whole-genome alignments to elucidate structural differences arising from insertions, deletions or from rearrangement events. Computational to...Tags: Bioinformatics, Plot, Synteny, Genome, Viewer, Comparative genomics
2655 days ago
CGView - Circular Genome Viewer
CGView is a Java package for generating high quality, zoomable maps of circular genomes. Its primary purpose is to serve as a component of sequence annotation pipelines, as a means of generating visual output suitable for the web. Feature information and rendering options are supplied to the prog...Tags: CGView, Circular, Genome, Viewer, Bacteria
2137 days ago
Tags: Consed, Finishing, Package, BAM, Viewer, Assembly, Editor, Autofinish, Autoreport, Autoedit, Align, Reads, Reference, Sequence
1540 days ago
Tags: Genome, Context, Viewer, GCV, Visualization
340 days ago
Dot, an interactive viewer for genome-genome comparison
Dot, an interactive dot plot viewer that allows genome scientists to visualize genome-genome alignments in order to evaluate new assemblies and perform exploratory comparative genomics. Dot supports the output of MUMmer’s nucmer aligner the most commonly used software method for alig...Tags: Dot, interactive, viewer, genome-genome, comparison
2293 days ago