String graph based genome assembly software and tools !
...1.SGA (String Graph Assembler) https://github.com/jts/sga Assembles large genomes from high coverage short read data. SGA is designed as a modular set of programs, which are us...2319 days ago
Bioinformatics tools for telomere to telomere assembly !
...y of data and the preprocessing pipeline (Rocío Amorín de Hegedüs @rocioadh)● tama (Transcriptome Annotation by Modular Algorithms) – software...983 days ago
RASTtk : algorithm for building custom annotation pipelines and annotating batches of genomes
...as become desirable to build a version of RAST that is both customizable and extensible. In this paper, we describe the RAST tool kit (RASTtk), a modular version of RAST that enables...2921 days ago
2794 days ago
Genome Assembly Tools and Software - PART2 !!
...eq data. AMOS 3.1.0 – Whole Genome Shotgun AssemblerAMOS (AModular, Open-Source) conso...roject acronym (AMOS) represents our primary goal — to produce A Modular, Open-Source whole genome ass...2677 days ago
Awesome perl frameworks, libraries and software - PART 3
...Specification cooper/yiria - the current generation of juno-ircd, an IRC server daemon written in the Perl programming language. it's very modular and event-driven, designed sp...2485 days ago
Bioinformatics Courses Around the World
...bsp;bioinformatics program Oxford Univ , UK Bioinformatics Centre , School of Pathology OUBC training courses Part-time Modular MSc in Bioinformatics and reg...3934 days ago
Commercial and public next-gen-seq (NGS) software
...ient manner. Robust to INDELs and MrsFAST has a bisulphite mode. Authors are from the University of Washington. C as source. MUMmer - MUMmer is a modular system for the rapid whole ge...3510 days ago
Mesquite: A modular system for evolutionary analysis
Mesquite is modular, extendible software for evolutionary biology, designed to help biologists organize and analyze comparative data about organisms. Its emphasis is on phylogenetic analysis, but some of its modules concern population genetics, while others do non-phylogenetic multivariate analys...Tags: Mesquite, modular, system, evolutionary, analysis
2474 days ago
Mesquite: A modular system for evolutionary analysis
Mesquite is modular, extendible software for evolutionary biology, designed to help biologists organize and analyze comparative data about organisms. Its emphasis is on phylogenetic analysis, but some of its modules concern population genetics, while others do non-phylogenetic multivariate analys...Tags: Mesquite, modular, system, evolutionary, analysis
2236 days ago