3225 days ago
RNA-Seq De novo Assembly Using Trinity
...Butterfly then processes the individual graphs in parallel, tracing the paths that reads and pairs of reads take within the graph, ultimately reporting full-length transcripts for a...2956 days ago
YASS :: genomic similarity search tool
...with bit-score and E-value evaluated according to the sequence background frequencies parameterizable output filter for low complexity repeats reporting of various alignment statisti...2916 days ago
EUKulele: Taxonomic annotation of the unsung eukaryotic microbes
EUKulele, an open-source software tool designed to assign taxonomy to microeukaryotes detected in meta-omic samples, and complement analysis approaches in other domains by accommodating assembly output and providing concrete metrics reporting the taxonomic completeness of each sample.1217 days ago
2640 days ago
transrate: Understanding your transcriptome assembly
...nscriptome assembly quality analysis. It examines your assembly in detail and compares it to experimental evidence such as the sequencing reads, reporting quality scores for contigs an...2114 days ago