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• • Rahul Nayak@rahul

  

  Rahul Nayak bookmarked DEG 5.0: a database of essential genes in both prokaryotes and eukaryotes 1369 days ago

  Essential genes are those indispensable for the survival of an organism, and their functions are therefore considered a foundation of life. Determination of a minimal gene set needed to sustain a life form, a fundamental question in biology, plays a...

  http://www.essentialgene.org/
• • Rahul Nayak@rahul

  

  Rahul Nayak published a blog post List of useful machine / ai learning resources ! 1369 days ago

  Learning resources !
• • Neel@neelam

  

  Neel posted to the wire 1373 days ago

  GitHub Grants for Open Source https://github.com/github/india/blob/main/Open%20Source/GRANTS.md #Github #Grants #Open #Source
• • Surabhi Chaudhary@surabhi

  

  Surabhi Chaudhary posted a new ad in the ResearchLabs Gamper Lab 1373 days ago
• • Surabhi Chaudhary@surabhi

  

  Surabhi Chaudhary created a new bio-script Python script to download covid genome ! 1373 days ago
• • Neel@neelam

  

  Neel posted to the wire 1375 days ago

  Bioinformatics tutorial and books at https://rsh249.github.io/bioinformatics/ #Books #Tutorial #Learn
• • LEGE@lege

  

  LEGE asked GLIBC_2.23' not found error with alienomics ! 1376 days ago

  (base) lege@Bathymodiolus:~$ ./alienomics_v0.3.1Can't load '/tmp/par-6a6974656e647261/cache-f3e57c2becbb7e00629c1273cf03dd05ad45721b/5b8c5ac2.so' for module POSIX: /lib/x86_64-linux-gnu/libm.so.6: version `GLIBC_2.23' not found (required by...
• • Jit@jit.aber

  

  Jit posted to the wire 1376 days ago

  Multi fasta to single fasta files $ perl -ne 'if (/^>(\S+)/) { close OUT; open OUT, ">$1.fasta" } print OUT' genome.fasta #Multi-fasta #fasta #multi #genome #files
• • Jit@jit.aber

  

  Jit posted to the wire 1376 days ago

  install PAR::Packer in unbuntu. $ sudo apt-get install libpar-packer-perl #pp #Perl #Ubuntu
• • Jit@jit.aber

  

  Jit bookmarked Public Databases for Bioinformatics ! 1376 days ago

  https://www.nature.com/articles/s41467-020-17155-yServer Infrastructure: File Server: dhara: Synology 3614 Storage Appliance 4 Core Xeon 108TB disk storage 10Gb ethernet to SCG3 Access atx: dhara:5000 Has btsync server (try it - its much...

  http://mitra.stanford.edu/
• • Jit@jit.aber

  

  Jit bookmarked Janggu - Deep learning for Genomics 1376 days ago

  Janggu is a python package that facilitates deep learning in the context of genomics. The package is freely available under a GPL-3.0 license. Detail tutorial at https://janggu.readthedocs.io/en/latest/ USE...

  https://github.com/BIMSBbioinfo/janggu
• • Ravindra Raut@Ravi

  

  Ravindra Raut has a new avatar 1377 days ago

  
• • Jitendra Narayan@admin

  

  Jitendra Narayan is now a friend with Ravindra Raut 1377 days ago

  • Jitendra Narayan@admin

  

  • Ravindra Raut@Ravi

  
• • Ravindra Raut@Ravi

  

  Ravindra Raut is now a friend with Jitendra Narayan 1377 days ago

  • Ravindra Raut@Ravi

  

  • Jitendra Narayan@admin

  
• • Neel@neelam

  

  Neel posted to the wire 1378 days ago

  Awesome Machine Learning https://github.com/josephmisiti/awesome-machine-learning#perl-data-analysis--data-visualization #AI #Machine #Learn #Teach #Repo
• • Rahul Nayak@rahul

  

  Rahul Nayak published a blog post List of bioinformatics packages for NGS analysis ! 1380 days ago

  Package suites gather software packages and installation tools for specific languages or platforms. We have some for bioinformatics software.
• • Rahul Nayak@rahul

  

  Rahul Nayak published a blog post List of bioinformatics workflow management tools ! 1380 days ago

  Workflow Managers
• • Rahul Nayak@rahul

  

  Rahul Nayak commented on a page titled List of non-commercial NGS genotype-calling software 1380 days ago

  Delly – Structural variant discovery by integrated paired-end and split-read analysis. [ paper-2012 ] lumpy – lumpy: a general probabilistic framework for structural variant discovery....
• • Rahul Nayak@rahul

  

  Rahul Nayak commented on a page titled Bioinformatics Companies in India 1380 days ago

  Bioinformatics startup https://www.genique.co/
• • Jit@jit.aber

  

  Jit commented on a bookmark DAVI: Deep learning-based tool for alignment and single nucleotide variant identification 1383 days ago

  DeepConflation based CNN model is used to generate alignment of fasta file . Model try to match a query string in a referance genome to provide location of match. https://github.com/gguptaiitd/DeepConflation

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