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• • Jitendra Narayan@admin

  

  Jitendra Narayan created a page Monitor running jobs on Linux server 4528 days ago

  You as a bioinformatican run lots of program on your servers. Sometime the shared server is also used by your colleague. If server is busy you sometime need to check the running programs and want to monitor the running programs as well. The "top"...
• • John Parker@parker

  

  John Parker posted to the wire 4528 days ago

  NGS analysis pipeline http://www.egr.msu.edu/changroup/Protocols/NGS%20analysis%20example%20of%20a%20pipeline.html #Pipeline #NGS #Genomics #Tutorial
• • John Parker@parker

  

  John Parker commented on a page titled Next generation sequencing in R or bioconductor environment in the group R and Bioconductor 4528 days ago

  We generally receive some common question like ... where to find human reference genome? What is reference annotation, how to download it etc. Here are some resources that I found...
• • Rahul Agarwal@raag

  

  Rahul Agarwal posted to the wire 4528 days ago

  FDA Applies Genome Sequencing !! http://www.foodsafetynews.com/2014/06/fda-applies-genome-sequencing-in-outbreak-investigation/#.U5G5zvmSych #FoodOmics
• • Rahul Agarwal@raag

  

  Rahul Agarwal posted to the wire 4528 days ago

  Small RNA Determines Sex !! http://www.biotechniques.com/news/Small-RNA-Determines-Sex/biotechniques-352151.html#.U5G2tPmSycg #RNaOmics #piRNA
• • Rahul Agarwal@raag

  

  Rahul Agarwal posted to the wire 4528 days ago

  Sheep genome decoded!! http://www.sciencemag.org/content/344/6188/1168.abstract #Omics #Seq
• • Rahul Agarwal@raag

  

  Rahul Agarwal posted to the wire 4528 days ago

  Genetic sequencing traced root of MERS!! http://time.com/2827822/it-looks-like-camels-actually-can-transmit-mers-to-humans/ #HealthOmics
• • Rahul Agarwal@raag

  

  Rahul Agarwal posted to the wire 4528 days ago

  http://www.nbcnews.com/health/health-news/boys-mysterious-infection-cured-after-dna-sequencing-n122871 #HealthOmics
• • Elin@elinwang

  

  Elin is now a friend with RAJESH DETROJA 4528 days ago

  • Elin@elinwang

  

  • RAJESH DETROJA@rajeshdetroja

  
• • RAJESH DETROJA@rajeshdetroja

  

  RAJESH DETROJA is now a friend with Elin 4528 days ago

  • RAJESH DETROJA@rajeshdetroja

  

  • Elin@elinwang

  
• • Jit@jit.aber

  

  Jit posted to the wire 4528 days ago

  Remove the blank space from a fasta file. perl -nlwe 'tr/ //d; print if length' fileName #Delete #Space #Fasta #Perl #Oneliner
• • Jit@jit.aber

  

  Jit posted to the wire 4528 days ago

  Remove N from a fasta file. Go to vi editor, type :%s/N\{25,\}//g and press enter. #Vim #vi #N #Replace #Fasta
• • Jit@jit.aber

  

  Jit posted to the wire 4528 days ago

  perl -nle 'if (/^>/) { $sl = 0; print; next } next if ($sl >= 200); $_ = substr($_, 0, 200-$sl) if ($sl + length($_) > 200); $sl += length($_); print;' file.fa >new.fa #Perl #Extract #Fasta
• • Elin@elinwang

  

  Elin is now a friend with Jitendra Narayan 4528 days ago

  • Elin@elinwang

  

  • Jitendra Narayan@admin

  
• • Jitendra Narayan@admin

  

  Jitendra Narayan is now a friend with Elin 4528 days ago

  • Jitendra Narayan@admin

  

  • Elin@elinwang

  
• • Jitendra Narayan@admin

  

  Jitendra Narayan posted a new ad in the Opportunity Post-doctoral Research Assistant in Genetics 4529 days ago
• • Rahul Nayak@rahul

  

  Rahul Nayak posted to the wire 4529 days ago

  rename all *.txt as *.bak: find . -name "*.txt" | sed "s/\.txt$//" | xargs -i echo mv {}.txt {}.bak | sh #Linux #Rename #Oneliner
• • Neel@neelam

  

  Neel commented on a page titled Commercial and public next-gen-seq (NGS) software in the group Next Generation Sequencing (NGS) 4529 days ago

  There are several other softwares Eland: http://illumina.ucr.edu/illumina_docs/Velvet:http://www.ebi.ac.uk/~zerbino/velvet/Maq (Mapping and Assembly with Quality): http://maq.sourceforge.net/maq-man.shtmlSOAP alignment tool:...
• • brijesh@brijesh

  

  brijesh is now a friend with Shyam I 4529 days ago

  • brijesh@brijesh

  

  • Shyam I@shyam_ingle

  
• • Shyam I@shyam_ingle

  

  Shyam I is now a friend with brijesh 4529 days ago

  • Shyam I@shyam_ingle

  

  • brijesh@brijesh

  

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