Hi Andaleeb,
DNA diagnostics using bioinformatics looks very impressive, which recently gained their importance due to industrial growth in human therapeutics and diagnostics sector. Now a dayz, human therapeutics and diagnostics become the larges...
R and Bioconductor for NGS data analysis http://master.bioconductor.org/help/course-materials/2012/CSC2012/Bioconductor-tutorial.pdf
http://manuals.bioinformatics.ucr.edu/home/ht-seq
Hi Alok,
You can try following Perl script on ur dataset. It will extract the numeric values and seperate it's chromosome, start and end coordinates with tabs in outFile.
usage : perl extractNumber.pl infileName > outFile
use strict;use...
I have a multiple fasta sequence file (~12GB size) with certain coordinate information:> chr13-/454-4567654 (2347645)AGTGACTGACTGAAGTGACTGA
> chr14-/524-8367954 (6535786)AGTGACTGAAGTGACTGAThe fasta sequence string would always have only one...