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This tool allows to retrieve number of cleavages yielded by commercially available endonucleases in up-to-date sequenced prokaryotic genomes. When the number of fragments is bellow 50, Pulse Field gel Electrophoresis (PFGE) is simulated. A tool for...

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Microsoft announced that Power BI custom visuals will soon be available as charts with Excel.

SWGIS v2.0 along with the EuGI database, which houses GIs identified in 66 different eukaryotic species, and the EuGI web-resource, provide the first comprehensive resource for studying HGT in...

Bioinformatics Faculty Jobs at MAHARSHI DAYANAND UNIVERSITY, ROHTAK http://www.mdurohtak.ac.in/pdf18/Advt/ADvertisement%2028%20of%202018.pdf #MDU #ROHTAK

Bioinformatic jobs at TATA MEMORIAL CENTRE ADVANCED CENTRE FOR TREATMENT, RESEARCH AND EDUCATION IN CANCER (ACTREC) http://www.actrec.gov.in/data%20files/Vacancies/2018/ACTREC-Advt-A-1-(COR)-2018.pdf

MECAT is an ultra-fast Mapping, Error Correction and de novo Assembly Tools for single molecula sequencing (SMRT) reads. MECAT employs novel alignment and error correction algorithms that are much more efficient than the state of art of aligners and...

Our Perl script for drawing requires the GD module(2.41 or later version). Moreover, the GD module requires the following packages. The gd graphics library The PNG graphics libraryThe zlib compression library

instructions successfully build Bandage on a fresh installation of Ubuntu 14.04

Mix is a tool that combines two or more draft assemblies, without relying on a reference genome and has the goal to reduce contig fragmentation and thus speed-up genome finishing. The proposed algorithm builds an extension graph where vertices...

Metassembler combines multiple whole genome de novo assemblies into a combined consensus assembly using the best segments of the individual assemblies. Genome assembly projects typically run multiple algorithms in an attempt to find the single best...

EvidentialGene is a genome informatics project, "Evidence Directed Gene Construction for Eukaryotes", to construct high quality, accurate gene sets for animals and plants, developed by Don Gilbert at Indiana University,...

HISAT2 is a fast and sensitive alignment program for mapping next-generation sequencing reads (both DNA and RNA) to a population of human genomes (as well as to a single reference genome). Based on an extension of BWT for...

Scallop is an accurate reference-based transcript assembler. Scallop features its high accuracy in assembling multi-exon transcripts as well as lowly expressed transcripts. Scallop achieves this improvement through a novel algorithm that can be...

This document contains instructions on how to use the MITObim pipeline described in Hahn et al. 2013. The full article can be found here. Kindly cite the article if you are using MITObim in your work. The pipeline was originally developed...

TIP: By default, environments are installed into the envs directory in your conda directory. Run conda create --help for information on specifying a different path. Use the Terminal or an Anaconda Prompt for the...

Activate python version in Conda. $ source activate py27 To deactivate $ source deactivate #Python #Activate #Deactivate #Conda

$ sudo apt-get install python-numpy python-scipy python-matplotlib ipython ipython-notebook python-pandas python-sympy python-nose[sudo] password for urbe: Reading package lists... DoneBuilding dependency tree Reading state information... DoneThe...

Bioinformatics Job at MDU, Rohtak http://www.mdurohtak.ac.in/pdf18/Advt/ADvertisement%2028%20of%202018.pdf #MDU #Rohtak