BOL

Updated version of deseq-DESeq2 ! http://www.bioconductor.org/packages/release/bioc/html/DESeq2.html #RNA #Expression

Tools for next-generation sequencing analysis: http://ngsutils.org

A program for annotating and predicting the effects of single nucleotide polymorphisms (SNP) http://snpeff.sourceforge.net/ http://snpeff.sourceforge.net/SnpEff_paper.pdf

Analysis tool for Oxford nanopore data!! https://github.com/arq5x/poretools #nanopore #omics #seq

skewer (transferred from https://sourceforge.net/projects/skewer) implements the bit-masked k-difference matching algorithm dedicated to the task of adapter trimming and it is specially designed for processing next-generation sequencing (NGS)...

The tool automatically downloads and unpacks the selected NCBI Blast databases from NCBI ftp server http://www.dnabaser.com/download/NCBI-BLAST-downloader/ #NCBI #Database #Download

Identification of chromosomal translocation hotspots via scan statistics http://bioinformatics.oxfordjournals.org/content/early/2014/07/18/bioinformatics.btu351.short?rss=1 #Chromosome #Hotspots

Bioinformatics jobs at http://career.jobs.net/q/search.aspx?SiteID=cbc_jobs_QS&LR=cbc_jobs&QSCHL=sb&k=bioinformatics&QSJBT=JN053&l=

When you're just starting out with biological programming, it's easy to run into complex problems that make you wonder how anyone has ever managed to write a program.

Bioinformatics scripts https://pypi.python.org/pypi/bioinfo/0.1.6