BOL

NGS with R ShortRead – Quality assesment of the reads, finding duplicates, trimming, string pattern searches [1] Biostrings – Reading sequences in R [2] BSGenomes – Reading in complete genomes and BioC annotation data...

Next generation sequencing data analysis with R/Bioconductor http://www.bioconductor.org/help/course-materials/2012/CSC2012/Bioconductor-tutorial.pdf

A library of efficient bioinformatics algorithms http://www.statistica.unimib.it/~dellavedova/papers/ALiBio-applied-bioinformatics.pdf

Introduction to Genetic Algorithms http://lancet.mit.edu/mbwall/presentations/IntroToGAs/ http://l1apc2.ens.utulsa.edu/~rogerw/cs7623/GA-Tutorial-93.doc

Algorithms in Bioinformatics http://www.iis.sinica.edu.tw/~hil/bioinfo/

Hi RaghavaGPS, Thanks for starting such a useful and debatable topic, which require proper attention from senior most bioinformatician and academicians. Back in 2001-2008 there were huge number of student interested to learn and get wet with this...

NodeXL is a free and open-source network analysis and visualization software package for Microsoft Excel 2007/2010. home: http://nodexl.codeplex.com/