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The Wire
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Jit
@jit.aber
Thread
By
Jit
2549 days ago
Rename
#non
-accepted
#nucleotide
from sequence to 'N' $ bbmap/reformat.sh in=genome.fa out=genomeOut.fa iupacToN=t
Shruti Paniwala
@shruti
Thread
By
Shruti Paniwala
2550 days ago
Asst
#Professor
#Bioinformatics
#pondicherry
university @
http:/
/
www.pondiuni.edu.in/
sites/
default/
files/
0_Application_0.pdf
Neel
@neelam
Thread
By
Neel
2552 days ago
#Plot
data along
#chromosome
#ideograms
https:/
/
bioconductor.org/
packages/
devel/
bioc/
vignettes/
IdeoViz/
inst/
doc/
Vignette.pdf
#IdeoViz
Shruti Paniwala
@shruti
Thread
By
Shruti Paniwala
2552 days ago
#Assembly
#Algorithms
for
#Next
-Generation Sequencing Data
https:/
/
www.ncbi.nlm.nih.gov/
pmc/
articles/
PMC2874646/
Jit
@jit.aber
Thread
By
Jit
2552 days ago
#Filter
out
#reads
with
#size
to discard reads containing many Ns. BBNorm (
https:/
/
sourceforge.net/
projects/
bbmap/
)
Jit
@jit.aber
Thread
By
Jit
2552 days ago
#Sickle
(
https:/
/
github.com/
najoshi/
sickle
) to
#trim
#reads
using a 20-Phred quality threshold
Jit
@jit.aber
Thread
By
Jit
2556 days ago
Remove the unnecessary
#fasta
#header
. $ sed 's/\s.*$//' Adineta_vaga_v2.0.scaffolds.fa > new_file.fasta
Shruti Paniwala
@shruti
Thread
By
Shruti Paniwala
2557 days ago
Explore the math with demos
https:/
/
www.desmos.com/
#math
#demo
#equation
#graph
#plot
Jit
@jit.aber
Thread
By
Jit
2557 days ago
Split the file in Linux with size. $ split --bytes=50M aaaa.fa
#split
#linux
#size
Jit
@jit.aber
Thread
By
Jit
2558 days ago
Know your age by blood sample
http:/
/
www.aging.ai/
#Blood
#AI
#Age
#Sample
Shruti Paniwala
@shruti
Thread
By
Shruti Paniwala
2559 days ago
The
#rainfall
#plot
: its
#motivation
,
#characteristics
and
#pitfalls
https:/
/
bmcbioinformatics.biomedcentral.com/
articles/
10.1186/
s12859-017-1679-8
Jit
@jit.aber
Thread
By
Jit
2559 days ago
Learn BioStat
http:/
/
www.biostathandbook.com/
#Bio
#Stat
#Learn
Shruti Paniwala
@shruti
Thread
By
Shruti Paniwala
2560 days ago
Young Professional
http:/
/
www.spices.res.in/
pdf/
interview-03.07.2017.pdf
#WalkIn
#IISER
Shruti Paniwala
@shruti
Thread
By
Shruti Paniwala
2562 days ago
Perl regular expression syntax.
https:/
/
www.cs.tut.fi/
~jkorpela/
perl/
regexp.html
#Perl
#Regexp
#Learn
#Help
Jit
@jit.aber
Thread
By
Jit
2563 days ago
Beginner’s
#guide
to
#comparative
#bacterial
genome
#analysis
using
#next
-generation sequence data
https:/
/
microbialinformaticsj.biomedcentral.com/
articles/
10.1186/
2042-5783-3-2
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