BOL

github.com - Required python modules biopython intervaltree numpy scipy tqdm PyYAML

github.com - Run a pipeline processing fast5s to a consensus in a single command. Recommended fixed "standard" and "fast" pipelines. Interchange basecaller, assembler, and consensus components of the pipelines simply by changing the target filepath. Seemless...

github.com - DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data. DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation...

github.com - an integrated bioinformatics pipeline for the detection of TE insertions in whole-genome shotgun data, called McClintock (https://github.com/bergmanlab/mcclintock), which automatically runs and standardizes output for multiple TE detection methods....

Fellowship (Doctoral Research In Biomedical Genomics, Including Statistical Genomics) Eligibility : MSc(Bio-Chemistry, Bio-Informatics, Bio-Tech, Mathematics / Applied Mathematics, Stati, Zoology) Location : Kolkata Last Date : 31 Dec...

Research Scientist/Project Associate/Project Assistant Jobs opportunity in Indian Institute of Technology Madras (IIT Madras) Research Scientist Qualification : Ph.D in any branch of life science or bioinformatics or computational biology...

Research Fellow Bioinformatics Eligibility : MSc(Bio-Chemistry, Bio-Informatics, Bio-Tech) Location : Ajmer Last Date : 13 Feb 2016 Hiring Process : Face to Face Interview Central University of Rajasthan Research Fellow Job vacancies...

www.ncbi.nlm.nih.gov - NCBI Remap. This tool is conceptually similar to liftOver in that in manages conversions between a pair of genome assemblies but it uses different methods to achieve these mappings. It is also available through a simple web interface or you can use...

Genetic differences among individuals reflect the combined effects of mutation, recombination, population history and natural selection. As a result, studies of natural variation can provide important insights into evolutionary and genetic...

cpansearch.perl.org - This is a collection of libraries and high-quality end-user scripts for bioinformatic analysis, including working with gene annotation, collecting data scores from a variety of modern file formats, and conversion between file formats. The...