RAJESH DETROJA
Junior Research Associate - Bioinformatics
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Bioinformatics tools for genome assembly !
Last updated 517 days ago by BioStarThere are numerous genome assembly tools available, each with its strengths and weaknesses. Here is a list of some widely used genome assembly tools as of my last update in September 2021: SPAdes: An assembler specifically designed for...BioKit: a set of tools dedicated to bioinformatics, data visualisation
By Neel 187 days agobiokit.readthedocs.io - BioKit is a set of tools dedicated to bioinformatics, data visualisation (biokit.viz), access to online biological data (e.g. UniProt, NCBI thanks to bioservices). It also contains more advanced tools related to data analysis...Manufacturing Life with J. Craig Venter
By Abhimanyu Singh 4133 days agoJ. Craig Venter, CEO of Synthetic Genomics, talks about finding genomic-driven solutions to address global needs such as new sources of energy, food and vaccines in an interview with James Bennet, Editor-in-Chief of The Atlantic. This program is...Bioinformatics Workshops - NO CODING REQUIRED
By eliabrodsky 2449 days agoPine Biotech is developing a project-based approach to online, effective workshops in bioinformatics. The resources are supplemented by a full online learning environment.Reference Sequence Resource!
By LEGE 1193 days agowww.encodeproject.org - The ENCODE project uses Reference Genomes from NCBI or UCSC to provide a consistent framework for mapping high-throughput sequencing data. In general, ENCODE data are mapped consistently to 2 human (GRCH38, hg19) and 2 mouse...pbalign: maps PacBio reads to reference sequences and saves alignments to a BAM file
By Jit 2404 days agogithub.com - pbalign aligns PacBio reads to reference sequences, filters aligned reads according to user-specific filtering criteria, and converts the output to either the SAM format or PacBio Compare HDF5 (e.g., .cmp.h5) format. The output Compare HDF5 file...Memories Can Be Passed Down Through DNA
By Radha Agarkar 3878 days agoThe premise of Assassin's Creed is the reliving of other people's memories stored inside DNA. Well scientists have found that in mice, it actually happens! Anthony is joined by special guest and our friend Tara Long from Hard Science to explain how...ARC: pipeline which facilitates iterative, reference guided de novo assemblies
By Jit 2341 days agoibest.github.io - ARC is a pipeline which facilitates iterative, reference guided de novo assemblies with the intent of: Reducing time in analysis and increasing accuracy of results by only considering those reads which should assemble...A History of Bioinformatics (in the Year 2039)
By Martin Jones 3805 days agoC. Titus Brown http://video.open-bio.org/video/1/a-history-of-bioinformatics-in-the-year-2039
