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Ideoplot
By Shruti Paniwala 2870 days agogithub.com - Simple ideogram plotting and annotation in R. Basic usage: Rscript Ideoplot.R --heatmap hm.bed --annotate annotations.bed --out ideogram.pdf -or- Rscript Ideoplot.R --annotate annotations.bed Options --ideobed, i A bed file of reference...Circular Visualization in R
By Jit 2728 days agozuguang.de - This is the documentation of the circlize package. Examples in the book are generated under version 0.4.1. If you use circlize in your publications, I would be appreciated if you can cite: Gu, Z. (2014) circlize implements and...IONiseR: tools for the quality assessment of data produced by Oxford Nanopore’s MinION sequencer
By Jit 2587 days agowww.bioconductor.org - This package is intended to provide tools for the quality assessment of data produced by Oxford Nanopore’s MinION sequencer. It includes a functions to generate a number plots for examining the statistics that we think will be useful for this...d3Network:Tools for creating D3 JavaScript network, tree, dendrogram, and Sankey graphs from R.
By Jit 2452 days agochristophergandrud.github.io - Mike Bostock’s D3.js is great for creating interactive network graphs with JavaScript. The d3Network package makes it easy to create these network graphs from R. The main idea is that you should able to take...Julia Programming Language, a Python and R rival
By Radha Agarkar 2312 days agoJulia Programming Language – A Real Python & R AlternativevisNetwork: an R package for network visualization, using vis.js javascript library
By Jit 2174 days agodatastorm-open.github.io - visNetwork is an R package for network visualization, using vis.js javascript library (http://visjs.org/). All remarks and bugs are welcome on github : https://github.com/datastorm-open/visNetwork. Features Based...GeneOverlap: An R package to test and visualize gene overlaps
By Jit 2187 days agobioconductor.org - Overlapping gene lists can reveal biological meanings and may lead to novel hypotheses. For example, histone modification is an important cellular mechanism that can pack and re-pack chromatin. By making the chromatin structure more dense or loose,...chromoMap-An R package for Interactive Visualization and Annotation of Chromosomes
By Jit 1934 days ago Comments (1)cran.r-project.org - chromoMap provides interactive, configurable and elegant graphics visualization of chromosomes or chromosomal regions allowing users to map chromosome elements (like genes,SNPs etc.) on the chromosome plot.Each chromosome is composed of...Github replacement !
By Rahul Nayak 1915 days agoGitLab as a replacement for for both GitHub and various continuous integration systemsScientist Bioinformatics Positions
Bioinformatics-Multi_Omics_Integration https://www.researchgate.net/job/939073_Senior_Scientist_Bioinformatics-Multi_Omics_Integration Senior_Scientist_Bioinformatics-Transcriptomics_Analysis...
