Jitendra Narayan
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List of generic simulation software/tools/resource with brief description and homepage !!!
Last updated 4560 days ago by JitList of generic simulation software/tools/resource with brief description and homepage ALF A Simulation Framework for Genome Evolution http://www.cbrg.ethz.ch/alfBayesian Serial SimCoal Bayesian Serial SimCoal, (BayeSSC) is a modification of...-
Commercial and public next-gen-seq (NGS) software
Last updated 4342 days ago by Partek Comments (7)Integrated solutions CLCbio Genomics Workbench - de novo and reference assembly of Sanger, Roche FLX, Illumina, Helicos, and SOLiD data. Commercial next-gen-seq software that extends the CLCbio Main Workbench software. Includes SNP detection,... -
List of Bioinformatics Software Tools for Next Generation Sequencing
Last updated 3732 days ago by JitCommercial tools Strand NGS offers many different tools including alignment, RNA-Seq, DNA-Seq, ChIP-Seq, Small RNA-Seq, Genome Browser, visualizations, Biological Interpretation, etc. Supports workflows “one can import the sample data in... List of bioinformatics packages for NGS analysis !
By Rahul Nayak 1965 days agoPackage suites gather software packages and installation tools for specific languages or platforms. We have some for bioinformatics software.The anatomy of successful computational biology software
By Jitendra Narayan 4683 days agoCreators of software widely used in computational biology discuss the factors that contributed to their successSoftware for genome assembly !
By LEGE 2167 days agoList of bioinformatics tools/Software Website References for genome assembly:BioinfoLab
Laboratory of Statistics and Computational tools for Bioinformatics The Laboratory of Statistics and Computational tools for Bioinformatics (BioinfoLab) is hosted at the Istituto per le Applicazioni del Calcolo "Mauro Picone" - CNR . The...Ten recommendations for creating usable bioinformatics command line software
By RAJESH DETROJA 4442 days agowww.gigasciencejournal.com - Bioinformatics software varies greatly in quality. In terms of usability, the command line interface is the first experience a user will have of a tool. Unfortunately, this is often also the last time a tool will be used. Here I present ten...-
Software packages for next gen sequence analysis
Last updated 4065 days ago by Rahul Nayak Comments (5)Integrated solutions * CLCbio Genomics Workbench - de novo and reference assembly of Sanger, Roche FLX, Illumina, Helicos, and SOLiD data. Commercial next-gen-seq software that extends the CLCbio Main Workbench software. Includes SNP detection,... -
Tools for Searching Repeats And Palindromic Sequences
Last updated 3034 days ago by Poonam Mahapatra Comments (2)What are genomic interspersed repeats? In the mid 1960's scientists discovered that many genomes contain stretches of highly repetitive DNA sequences ( see Reassociation Kinetics Experiments, and C-Value Paradox ). These sequences were later...
