Jit
Enthusiast computational biologist with business dream !!!
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simuG: a general-purpose genome simulator
By BioStar 1824 days agogithub.com - Simulated genomes with pre-defined and random genomic variants can be very useful for benchmarking genomic and bioinformatics analyses. Here we introduce simuG, a lightweight tool for simulating the full-spectrum of genomic variants (single...You and your friend have similar DNA !!!
By Jit 3773 days agoYour friends may be as genetically similar to you as your fourth cousin ...MitoZ: a toolkit for animal mitochondrial genome assembly, annotation and visualization
By Jit 1767 days agogithub.com - MitoZ is a Python3-based toolkit which aims to automatically filter pair-end raw data (fastq files), assemble genome, search for mitogenome sequences from the genome assembly result, annotate mitogenome (genbank file as result), and mitogenome...Protein function annotation and machine learning - UPMC - Paris, France
Protein function annotation and machine learning - UPMC - Paris, France Job Description: We are interested in finding an excellent postdoc with interests in protein functional annotation, machine learning and computer grids. The position is open...China’s BGI says it can sequence a genome for just $100
By Neel 1731 days ago Comments (6)China’s BGI says it can sequence a genome for just $100Assistant Professor in Bioinformatics at Indian Institute of Technology Delhi
Indian Institute of Technology Delhi Hauz Khas ,New Delhi – 110016 ROLLING ADVERTISEMENT NO. 01/2014(E-1) ADVERTISEMENT FOR THE POSITIONS OF ASSISTANT PROFESSOR CANDIDATES CAN APPLY ANY TIME DURING THE YEAR. IIT Delhi invites applications...RefKA: A fast and efficient long-read genome assembly approach for large and complex genomes
By Rahul Nayak 1669 days agogithub.com - RefKA, a reference-based approach for long read genome assembly. This approach relies on breaking up a closely related reference genome into bins, aligning k-mers unique to each bin with PacBio reads, and then assembling each bin in parallel...Lecturer/Senior Lecturer (Level B/C) in Bioinformatics
Lecturer/Senior Lecturer (Level B/C) in Synthetic Biology, Research Fellow (Level B) in Synthetic Biology & Lecturer/Senior Lecturer (Level B/C) in Bioinformatics Apply now Job no: 494553 Work type: Continuing full time Vacancy type:...merqury: Evaluate genome assemblies with k-mers
By Jit 1605 days agogithub.com - Often, genome assembly projects have illumina whole genome sequencing reads available for the assembled individual. The k-mer spectrum of this read set can be used for independently evaluating assembly quality without the need of a high quality...PhD opportunity at Université de Liège - Belgium
The Bioinformatics and Systems Biology Unit of Université de Liège (Belgium) is looking for a highly motivated master student with programming skills for a PhD thesis project (4 years, fully funded) with the goal of designing computational tools...
