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Understanding kmer !
By BioStar 1814 days agobioinfologics.github.io - What is a k-mer anyway? A k-mer is just a sequence of k characters in a string (or nucleotides in a DNA sequence). Now, it is important to remember that to get all k-mers from a sequence you need to get...MitoHiFi: a python pipeline for mitochondrial genome assembly from PacBio high fidelity reads
By Abhi 1065 days agogithub.com - MitoHiFi v3.2 is a python pipeline distributed under MIT License ! MitoHiFi was first developed to assemble the mitogenomes for a wide range of species in the Darwin Tree of Life Project...Jabba: Hybrid Error Correction for Long Sequencing Reads
By Jit 3135 days agogithub.com - Jabba is a hybrid error correction tool to correct third generation (PacBio / ONT) sequencing data, using second generation (Illumina) data. Input Jabba takes as input a concatenated de Bruijn graph and a set of sequences: the de Bruijn graph...QuorUM: An Error Corrector for Illumina Reads
By BioStar 2374 days agowww.genome.umd.edu - We produce trimmed and error-corrected reads that result in assemblies with longer contigs and fewer errors. We compared QuorUM against several published error correctors and found that it is the best performer in most metrics we use. QuorUM is...Trust But Verify: Sequencing Your Cell Lines Might Reveal an Uninvited Guest
By LEGE 428 days agoHigh-throughput sequencing has become indispensable in cell biology, enabling detailed insights into chromatin structure, gene expression, and regulatory dynamics. Yet, when faced with unexpectedly low mapping rates to the human genome,...List of universities offering Bachelor or Master bioinformatics degree in Pakistan
By Reshma Khatun 3333 days agoThere are a lot of universities offering Bachelor or Master degree in Pakistan. Following are the list of few intitute/universitiesList of universities offering Bachelor, Master or PhD bioinformatics degree in Malaysia
By sahabuddin 3332 days agoThe real bioinformatics scope lies if there are research labs which work in this field. One has to take account of that. If so then try to get information of those labs and visit them to get a hang of the work they pursue. For detail...UIAR Short-Term Training/Final Year Dissertation Project in Life Sciences/Bioinformatics/Biotech
Short-term training/Final year dissertation project Candidates desirous of doing a short-term training / final year dissertation project for MSc (Life Sciences/Bioinformatics/Biotechnology or any science discipline) at UIAR Biophysics and...Alessandra Carbone Lab
Our group works on various problems connected with the functioning and evolution of biological systems. We use mathematical tools, coming from statistics and combinatorics, algorithmic tools and molecular physics tools to study basic principles of...X. Shirley Liu Lab
The research in our laboratories are focused on the following three areas: Bioinformatics Cancer Epigenetics More at http://liulab.dfci.harvard.edu/
