Jitendra Narayan
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MGSE: Mapping-based Genome Size Estimation
By Shruti Paniwala 1775 days agogithub.com - MGSE can harness the power of files generated in genome sequencing projects to predict the genome size. Required are the FASTA file containing a high continuity assembly and a BAM file with all available reads mapped to this assembly. The script...U-Plot: Genome U-Plot sample implementation
By Rahul Nayak 1729 days agogithub.com - The Genome U-Plot is a JavaScript tool to visualize Chromosomal abnormalities in the Human Genome using a U-shape layout.Genome assembly training tutorial at Galaxy !
By Jit 1429 days ago Comments (1)training.galaxyproject.org - In this tutorial we assemble and annotate the genome of E. coli strain C-1. This strain is routinely used in experimental evolution studies involving bacteriophages. For instance, now classic works by Holly Wichman and Jim Bull (Bull 1997, Bull...QuasiModo - Quasispecies Metric Determination on Omics
By Neel 1248 days agogithub.com - This repository contains the scripts and pipeline that reproduces the results of the HCMV benchmarking study. In this study we evaluated genome assemblers and variant callers on 10 in vitro generated, mixed strain HCMV sequence samples, each...OGDRAW - Draw Organelle Genome Maps
By Abhi 1148 days agochlorobox.mpimp-golm.mpg.de - OrganellarGenomeDRAW converts annotations in the GenBank or EMBL/ENA format into graphical maps. The input has to be a GenBank or EMBL/ENA flat file wherase the output can vary among several types of files....Asst. Professor at Central University of Jharkhand (CUJ)
Central University of Jharkhand (CUJ) has issued a recruitment notification for the recruitment of Assistant Professor through recruitment notification – Central University of Jharkhand (CUJ) Recruitment 2015 – Advt. No.: CUJ/Advt./14-15/15 Date:...UCSC SARS-CoV-2 Genome Browser
By Jit 1054 days agowww.nature.com - The UCSC SARS-CoV-2 Genome Browser (https://genome.ucsc.edu/covid19.html) is an adaptation of our popular genome-browser visualization tool for this virus, containing many annotation tracks and new features, including conservation with similar...RA Bioinformatics at Ch. Charan Singh University, Meerut
Ch. Charan Singh University, Meerut http://molbiolabccsumrt.webs.com/ Applications are invited for one post of RA in a DBT funded research project “Creation of Bioinformatics Infrastructure Facility (BIF) for the promotion of Biology Teaching...MUM&Co is a simple bash script that uses Whole Genome Alignment information provided by MUMmer...
By Rahul Nayak 944 days agogithub.com - MUM&Co is able to detect:Deletions, insertions, tandem duplications and tandem contractions (>=50bp & <=150kb)Inversions (>=1kb) and translocations (>=10kb)Coding Ground
By Jitendra Narayan 3542 days agowww.tutorialspoint.com - Online coding group for most of the programming languages. Code in almost all popular languages using Coding Ground. Edit, compile, execute and share your projects, 100% cloud. http://www.tutorialspoint.com/codingground.htm
