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Easyfig
By Poonam Mahapatra 3108 days agoeasyfig.sourceforge.net - Easyfig has moved to github, for newer releases of Easyfig please visit our new webpage - https://mjsull.github.io/Easyfig. Easyfig is a Python application for creating linear comparison figures of multiple genomic loci with an easy-to-use...Research Fellow Bioinformatics
Research Fellow Bioinformatics Eligibility : BSc(Bio-Tech), MSc(Bio-Tech) Location : Ludhiana Last Date : 19 Apr 2016 Hiring Process : Walk - In Punjab Agricultural University Research Fellow Bioinformatics job opportunities in Punjab...RACA: Reference-Assisted Chromosome Assembly
By Priya Singh 3131 days ago Comments (1)bioen-compbio.bioen.illinois.edu - Rreference-Assisted Chromosome Assembly (RACA), an algorithm to reliably order and orient sequence scaffolds generated by NGS and assemblers into longer chromosomal fragments using comparative genome information and paired-end...REAPR: a universal tool for genome assembly evaluation
By Jitendra Prajapati 3131 days ago Comments (1)genomebiology.biomedcentral.com - REAPR is a tool that evaluates the accuracy of a genome assembly using mapped paired end reads, without the use of a reference genome for comparison. It can be used in any stage of an assembly pipeline to automatically break incorrect scaffolds and...Trimmomatic: A flexible read trimming tool for Illumina NGS data
By Jit 3122 days agowww.usadellab.org - Paired End: java -jar trimmomatic-0.35.jar PE -phred33 input_forward.fq.gz input_reverse.fq.gz output_forward_paired.fq.gz output_forward_unpaired.fq.gz output_reverse_paired.fq.gz output_reverse_unpaired.fq.gz ILLUMINACLIP:TruSeq3-PE.fa:2:30:10...Desai Lab
Evolutionary Dynamics and Population Genetics Natural selection and other evolutionary forces lead to particular patterns of evolutionary dynamics, and they leave characteristic signatures on the genetic variation within populations. We use a...ALE: a Generic Assembly Likelihood Evaluation Framework for Assessing the Accuracy of Genome and...
By Neel 3112 days ago Comments (1)sc932.github.io - Assembly Likelihood Evaluation (ALE) framework that overcomes these limitations, systematically evaluating the accuracy of an assembly in a reference-independent manner using rigorous statistical methods. This framework is comprehensive, and...RASTtk : algorithm for building custom annotation pipelines and annotating batches of genomes
By Abhi 3110 days agohttp://rast.nmpdr.org/ - The RAST (Rapid Annotation using Subsystem Technology) annotation engine was built in 2008 to annotate bacterial and archaeal genomes. It works by offering a standard software pipeline for identifying genomic features (i.e., protein-encoding genes...Bioinformatics National Certification (BINC) Examination 2016
Bioinformatics National Certification (BINC) Examination 2016 Department of Biotechnology, Government of India, New Delhi & Pondicherry University, Puducherry Starting of online submission of application : April 13, 2016 Last date for...
