Jit
Enthusiast computational biologist with business dream !!!
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HapCUT2: robust and accurate haplotype assembly for diverse sequencing technologies
By Jit 2854 days agogithub.com - HapCUT2 is a maximum-likelihood-based tool for assembling haplotypes from DNA sequence reads, designed to "just work" with excellent speed and accuracy. We found that previously described haplotype assembly methods are specialized for specific read...nanofilt: Filtering and trimming of long read sequencing data
By Jit 2778 days ago Comments (1)github.com - Filtering on quality and/or read length, and optional trimming after passing filters.Reads from stdin, writes to stdout. Intended to be used: directly after fastq extraction prior to mapping in a stream between extraction and...Postdoctoral Researcher in Cancer Systems Biology
Postdoctoral Researcher in Cancer Systems Biology Department of Oncology, Old Road Campus Research Building, Roosevelt Drive, Oxford Grade 7: £30,434 - £37,394 with a discretionary range to £40,847 p.a. Applications are invited for a Postdoctoral...NanoPack: visualizing and processing long-read sequencing data
By Jit 2766 days agogithub.com - The NanoPack tools are written in Python3 and released under the GNU GPL3.0 License. The source code can be found at https://github.com/wdecoster/nanopack, together with links to separate scripts and their documentation. The scripts are...Interactive Market Intelligence
By Pranjali Yadav 4066 days agoBioInformatics introduces 'Interactive Market Intelligence', a cloud-based market research tool for life science industryAMStat: display statistics of large sequence files from next generation sequencing projects
By Neel 2675 days agosamstat.sourceforge.net - SAMStat is an efficient C program to quickly display statistics of large sequence files from next generation sequencing projects. When applied to SAM/BAM files all statistics are reported for unmapped, poorly and accurately mapped reads...Bioinformatics Project Fellow at Institute of Genomics & Integrative Biology - New Delhi, Delhi
Pay Scale: Rs. 16,000/- + 30 % HRA per month Educational Requirements: M.Sc. in Bioinformatics with at least 55% marks Qualifications: Knowledge of Perl, R and other programming language or Database management or knowledge of pipelines to analyze...EXCAVATOR: detecting copy number variants from whole-exome sequencing data
By Radha Agarkar 2620 days agosourceforge.net - EXCAVATOR, for the detection of copy number variants (CNVs) from whole-exome sequencing data. EXCAVATOR combines a three-step normalization procedure with a novel heterogeneous hidden Markov model algorithm and a calling method that classifies...List of universities offering Bachelor or Master bioinformatics degree in Pakistan
By Reshma Khatun 3182 days agoThere are a lot of universities offering Bachelor or Master degree in Pakistan. Following are the list of few intitute/universities
