Jit
Enthusiast computational biologist with business dream !!!
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Circlator: automated circularization of genome assemblies using long sequencing reads
By Poonam Mahapatra 3006 days agosanger-pathogens.github.io - A tool to circularize genome assemblies. The algorithm and benchmarks are described in the Genome Biology manuscript. Citation: "Circlator: automated circularization of genome assemblies using long sequencing reads", Hunt et al, Genome Biology...List of Bioinformatics Vacancy, Jobs, Opportunity websites
By Jitendra Narayan 4650 days ago Comments (125)www.nature.com - Bioinformatics cover wide area of biology, and indulge in almost all sort of science related work. Bioinformatician give strong emphasis on open access to biological information as well as Free and Open Source software!! There are several jobs...PRICE (Paired-Read Iterative Contig Extension), a de novo genome assembler implemented in C++.
By Surabhi Chaudhary 2979 days agoderisilab.ucsf.edu - We are pleased to release PRICE (Paired-Read Iterative Contig Extension), a de novo genome assembler implemented in C++. Its name describes the strategy that it implements for genome assembly: PRICE uses paired-read information to iteratively...MATHomics Lab
Mathomics is a collaborative research group of the Center for Mathematical Modeling and the Center for Genome Regulation at University of Chile, created to play a central role in the development of biotechnological projects, providing state of the...Research Assistant @ University of Hyderabad
University of Hyderabad Repository for Tomato Genomic Resources Department of Plant Sciences Bioinformatics Position in Tomato Functional Genomics At the Repository for Tomato Genomics Resources, we are working on Tomato Functional Genomics,...Converting a VCF into a FASTA given some reference !
By Jit 2940 days agoconverting a VCF file into a FASTA file given a reference sequenceBOKU Lab
We are interested in the study of complex systems in living organisms. Novel views augmenting the classical gene by gene approaches are required to overcome the engineered redundancies and combinatorial effects prevalent in higher eukaryotes. We...LR_Gapcloser: a tiling path-based gap closer that uses long reads to complete genome assembly
By Rahul Nayak 2275 days agogithub.com - LR_Gapcloser is a gap closing tool using long reads from studied species. The long reads could be downloaed from public read archive database (for instance, NCBI SRA database ) or be your own data. Then they are fragmented and aligned to scaffolds...Postdoctoral Position (Bioinformatics/Computational Biology)
University College Cork LAPTI Cork-Co Cork-Ireland Postdoctoral position is available for three years to work on development of Bioinformatics resources for the analysis and visualization of ribosome profiling data. Ribosome profiling...Critical to discoveries in bioinformatics
By Surajeet 4616 days agoEMBL-EBI distributes datasets worldwide using the Janet network. This biological data enables the discovery of new drugs, new diagnostics and increasingly new agro-chemicals. Their work, which includes the 1000-genome project, has generated...
