Jit
Enthusiast computational biologist with business dream !!!
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PLAST: A fast, accurate and NGS scalable bank-to-bank sequence similarity search tool
By Jit 2551 days agohttps://plast.inria.fr/ - PLAST is a fast, accurate and NGS scalable bank-to-bank sequence similarity search tool providing significant accelerations of seeds-based heuristic comparison methods, such as the Blast suite of algorithms. Relying on unique software architecture,...Project Associate Bioinformatics @ Central Food Technological Research Institute (CFTRI)
Central Food Technological Research Institute (CFTRI) Project Assistant (Level-II) job position in Central Food Technological Research Institute (CFTRI) on a temporary contractual basis in the research project (GAP 0469) funded by Science &...Porechop: tool for finding and removing adapters from Oxford Nanopore reads
By Rahul Nayak 2372 days agogithub.com - Porechop is a tool for finding and removing adapters from Oxford Nanopore reads. Adapters on the ends of reads are trimmed off, and when a read has an adapter in its middle, it is treated as chimeric and chopped into separate reads. Porechop...NRCO Vacancies For Junior Research Fellow – Pakyong, Sikkim
Junior Research Fellow Pay Scale:Rs 25,000/- Educational Requirements:MSc (with NET qualification) / M.Tech degree (with or without NET) with minimum 55% marks in Biotechnology/ Bioinformatics/ Molecular Biology or any other related field. Other...RNA-seq Analysis Workshop Course Materials
By Jit 2337 days agochagall.med.cornell.edu - RNAseq can be roughly divided into two "types": Reference genome-based - an assembled genome exists for a species for which an RNAseq experiment is performed. It allows reads to be aligned against the reference genome and significantly improves...AlignQC: A tool for assessing an alignment, and generating reports that are easy to share
By Jit 2302 days agowww.healthcare.uiowa.edu - Long read alignment analysis. Generate a reports on sequence alignments for mappability vs read sizes, error patterns, annotations and rarefraction curve analysis. The most basic analysis only requires a BAM file, and outputs a web browser...Assistant Professor, Central University of Himachal Pradesh, India
Central University of Himachal Pradesh PO Box: 21 DHARAMSHALA, DISTRICT KANGRA, HIMACHAL PRADESH – 176215 EMPLOYMENT NOTICE NO.: 02 / 2015 APPOINTMENT TO VARIOUS TEACHING, NON-TEACHING AND OTHER ACADEMIC STAFF POSITIONS Applications...Platypus: A Haplotype-Based Variant Caller For Next Generation Sequence Data
By Shruti Paniwala 2223 days agowww.well.ox.ac.uk - Platypus is a tool designed for efficient and accurate variant-detection in high-throughput sequencing data. By using local realignment of reads and local assembly it achieves both high sensitivity and high specificity. Platypus can detect...RECRUITMENT FOR 6 POSITIONS OF JRF (Junior Research Fellow)
Institute of Bioresources and Sustainable Development (IBSD), a National Institute of the Department of Biotechnology, Government of India invites applications for 6 positions of JRF for 2015. The main mandate of IBSD is Conservation and Sustainable...snakepipes: A toolkit based on snakemake and python for analysis of NGS data
By Jit 2006 days agogithub.com - snakePipes are flexible and powerful workflows built using snakemake that simplify the analysis of NGS data. DNA-mapping* ChIP-seq* RNA-seq* ATAC-seq* scRNA-seq Hi-C Whole Genome Bisulfite Seq/WGBS (*Also available in...
